U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Nucleotidyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823717, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Nucleotidyltransferase family protein
    Primary source
    TAIR:AT3G45750
    Locus tag
    AT3G45750
    See related
    Araport:AT3G45750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (16793515..16798000, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene hydrolase family protein / HAD-superfamily protein Neighboring gene ncRNA Neighboring gene pseudo Neighboring gene Nucleotidyltransferase family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_001203086.1
    NM_001339218.1
    NM_001339219.1
    NM_001339220.1
    NM_114444.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Nucleotidyltransferase family protein
    NP_001190015.1
    • Nucleotidyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1).
    NP_190161.2
    • Nucleotidyltransferase family protein; BEST Arabidopsis thaliana protein match is: Nucleotidyltransferase family protein (TAIR:AT3G45760.1); Has 1473 Blast hits to 1374 proteins in 212 species: Archae - 0; Bacteria - 1; Metazoa - 793; Fungi - 286; Plants - 167; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      16793515..16798000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114444.4 → NP_190161.2  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XIN2, A0A654FD39, Q7Y216
      Conserved Domains (1) summary
      COG5260
      Location:14 → 353
      TRF4; DNA polymerase sigma [Replication, recombination and repair]

    2. NM_001339218.1 → NP_001326899.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQN9, A0A5S9XIN2

    3. NM_001339219.1 → NP_001326898.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQN9, A0A5S9XIN2

    4. NM_001203086.1 → NP_001190015.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XIN2, F4J6R2
      Conserved Domains (1) summary
      cd05402
      Location:3 → 121
      NT_PAP_TUTase; Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases

    5. NM_001339220.1 → NP_001326897.1  Nucleotidyltransferase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQN7, A0A5S9XIN2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.