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    DDE1 Dde1p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856441, updated on 9-Dec-2024

    Summary

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    Official Symbol
    DDE1
    Official Full Name
    Dde1p
    Primary source
    SGD:S000001087
    Locus tag
    YHR045W
    See related
    AllianceGenome:SGD:S000001087; FungiDB:YHR045W; VEuPathDB:YHR045W
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See DDE1 in Genome Data Viewer
    Location:
    chromosome: VIII
    Exon count:
    1
    Sequence:
    Chromosome: VIII; NC_001140.6 (195551..197233)

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene 2-deoxyglucose-6-phosphatase Neighboring gene 2-deoxyglucose-6-phosphatase Neighboring gene inositol monophosphate 1-phosphatase INM1 Neighboring gene arginine/alanine aminopeptidase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001140.6

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global analysis of the yeast knockout phenome. Turco G, et al. Sci Adv, 2023 May 26. PMID 37235661, Free PMC Article
    2. A chemical potentiator of copper-accumulation used to investigate the iron-regulons of Saccharomyces cerevisiae. Foster AW, et al. Mol Microbiol, 2014 Jul. PMID 24895027, Free PMC Article
    3. Novel insights into iron metabolism by integrating deletome and transcriptome analysis in an iron deficiency model of the yeast Saccharomyces cerevisiae. Jo WJ, et al. BMC Genomics, 2009 Mar 25. PMID 19321002, Free PMC Article
    4. Perinuclear cohibin complexes maintain replicative life span via roles at distinct silent chromatin domains. Chan JN, et al. Dev Cell, 2011 Jun 14. PMID 21664583
    5. Host factors that affect Ty3 retrotransposition in Saccharomyces cerevisiae. Aye M, et al. Genetics, 2004 Nov. PMID 15579677, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum HDA PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Dde1p
    NP_011911.1
    • Protein involved in DNA damage response and ergosterol biosynthesis; acts in cooperation with Dap1p in regulating DNA damage response and ergosterol biosynthesis

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6 Reference assembly

      Range
      195551..197233
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179175.1 → NP_011911.1  TPA: Dde1p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_011911.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D3DKZ3, P38775
      UniProtKB/TrEMBL
      A6ZSV2, B3LSG4, G2WFB8, N1P572
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P38775.1

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