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    NRSN1 neurensin 1 [ Homo sapiens (human) ]

    Gene ID: 140767, updated on 10-Dec-2024

    Summary

    Official Symbol
    NRSN1provided by HGNC
    Official Full Name
    neurensin 1provided by HGNC
    Primary source
    HGNC:HGNC:17881
    See related
    Ensembl:ENSG00000152954 MIM:616630; AllianceGenome:HGNC:17881
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    VMP; p24
    Summary
    Predicted to be involved in nervous system development. Predicted to be located in cytoplasmic vesicle and growth cone. Predicted to be active in neuron projection; neuronal cell body; and transport vesicle. [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Restricted expression toward brain (RPKM 31.6) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See NRSN1 in Genome Data Viewer
    Location:
    6p22.3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (24126215..24147530)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (23997883..24019208)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (24126443..24147758)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene ISG20L2 pseudogene 1 Neighboring gene heterogeneous nuclear ribonucleoprotein A1 pseudogene 58 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24150 Neighboring gene MPRA-validated peak5732 silencer Neighboring gene small nucleolar RNA SNORD46 Neighboring gene doublecortin domain containing 2 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr6:24323956-24324653 Neighboring gene kidney associated DCDC2 antisense RNA 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association study of chronic periodontitis in a general German population.
    EBI GWAS Catalog
    Whole genome association scan for genetic polymorphisms influencing information processing speed.
    EBI GWAS Catalog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in nervous system development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nervous system development ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasmic vesicle ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in growth cone ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in neuron projection IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in neuron projection ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in neuronal cell body IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in neuronal cell body ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in transport vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in transport vesicle TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    neurensin-1
    Names
    neuro-p24
    vesicular membrain protein p24
    vesicular membrane protein of 24 kDa
    vesicular membrane protein p24

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_080723.5NP_542454.3  neurensin-1

      See identical proteins and their annotated locations for NP_542454.3

      Status: VALIDATED

      Source sequence(s)
      AF418980, AK096290, BC023514, DB552652, DB553646, FO393410
      Consensus CDS
      CCDS4549.1
      UniProtKB/Swiss-Prot
      B2RAV4, Q8IZ57, Q8N8R6, Q96P21
      UniProtKB/TrEMBL
      Q5VTS0
      Related
      ENSP00000367752.4, ENST00000378491.9
      Conserved Domains (1) summary
      pfam14927
      Location:23153
      Neurensin

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      24126215..24147530
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      23997883..24019208
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)