U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    side-VI sidestep VI [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 4379854, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    side-VIprovided by FlyBase
    Official Full Name
    sidestep VIprovided by FlyBase
    Primary source
    FLYBASE:FBgn0083950
    Locus tag
    Dmel_CG34114
    See related
    AllianceGenome:FB:FBgn0083950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    34114; CG14698; CG34114; CG4695; Dmel\CG34114
    Summary
    Is expressed in A1-7 ventral longitudinal muscle cell; abdominal intersegmental bidendritic neuron isbp; adult head; dorsal median cell; and larval central nervous system. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See side-VI in Genome Data Viewer
    Location:
    86C14-86D1; 3-50 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10972381..11050175)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6798103..6875897)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Testis EndoG-Like 4 Neighboring gene long non-coding RNA:CR45561 Neighboring gene long non-coding RNA:CR46007 Neighboring gene long non-coding RNA:CR44940 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Barriers to male transmission of mitochondrial DNA in sperm development. DeLuca SZ, et al. Dev Cell, 2012 Mar 13. PMID 22421049, Free PMC Article
    2. Searching for guidance cues: follow the Sidestep trail. Aberle H. Fly (Austin), 2009 Oct-Dec. PMID 19786838
    3. Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development. Li H, et al. Elife, 2017 Aug 15. PMID 28829740, Free PMC Article
    4. The genetic basis of incipient sexual isolation in Drosophila melanogaster. Yamamoto A, et al. Proc Biol Sci, 2024 Aug. PMID 39045689, Free PMC Article
    5. Oligodendrocytes Provide Antioxidant Defense Function for Neurons by Secreting Ferritin Heavy Chain. Mukherjee C, et al. Cell Metab, 2020 Aug 4. PMID 32531201, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    sidestep VI
    Names
    CG34114-PB
    CG34114-PC
    side-VI-PB
    side-VI-PC

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      10972381..11050175
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001043240.3 → NP_001036705.1  sidestep VI, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001036705.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0KI85
      Conserved Domains (5) summary
      smart00408
      Location:364 → 429
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:363 → 440
      IG_like; Immunoglobulin like
      pfam00041
      Location:545 → 622
      fn3; Fibronectin type III domain
      pfam13927
      Location:157 → 230
      Ig_3; Immunoglobulin domain
      cl11960
      Location:265 → 343
      Ig; Immunoglobulin domain

    2. NM_001170115.2 → NP_001163586.1  sidestep VI, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163586.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A4IJ60, E1JII4
      Conserved Domains (6) summary
      cd00096
      Location:43 → 124
      Ig; Immunoglobulin domain
      smart00408
      Location:364 → 429
      IGc2; Immunoglobulin C-2 Type
      smart00410
      Location:363 → 440
      IG_like; Immunoglobulin like
      pfam00041
      Location:545 → 622
      fn3; Fibronectin type III domain
      pfam13927
      Location:157 → 230
      Ig_3; Immunoglobulin domain
      cl11960
      Location:265 → 343
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E1JII4 E1JII4
    Q0KI85 Q0KI85

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools