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    CG15073 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 37155, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15073provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0034379
    Locus tag
    Dmel_CG15073
    See related
    AllianceGenome:FB:FBgn0034379
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15073
    Summary
    Predicted to enable DNA-binding transcription factor activity and transcription cis-regulatory region binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15073 in Genome Data Viewer
    Location:
    55E9-55E9; 2-86 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (18705977..18708226)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (14593482..14595731)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Salt-inducible kinase 3 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR33942 Neighboring gene Vacuolar protein sorting 51 Neighboring gene Heparan sulfate 3-O sulfotransferase-A Neighboring gene mir-4982 stem loop

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A putative amino acid transporter of the solute carrier 6 family is upregulated by lithium and is required for resistance to lithium toxicity in Drosophila. Kasuya J, et al. Neuroscience, 2009 Oct 20. PMID 19619614, Free PMC Article
    2. Salt inducible kinases as novel Notch interactors in the developing Drosophila retina. Şahin HB, et al. PLoS One, 2020. PMID 32542037, Free PMC Article
    3. Structural basis of diversity and homodimerization specificity of zinc-finger-associated domains in Drosophila. Bonchuk A, et al. Nucleic Acids Res, 2021 Feb 26. PMID 33638995, Free PMC Article
    4. Genomic expansion and clustering of ZAD-containing C2H2 zinc-finger genes in Drosophila. Chung HR, et al. EMBO Rep, 2002 Dec. PMID 12446571, Free PMC Article
    5. ZAD-Domain Is Essential for Nuclear Localization of Insulator Proteins in Drosophila melanogaster. Zolotarev NA, et al. Acta Naturae, 2016 Jul-Sep. PMID 27795848, Free PMC Article

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables transcription cis-regulatory region binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15073-PA
    CG15073-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      18705977..18708226
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_137518.3 → NP_611362.2  uncharacterized protein Dmel_CG15073, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_611362.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZBC5, B5X520, Q8SYU8
      Related
      FBpp0085790
      Conserved Domains (2) summary
      sd00017
      Location:437 → 458
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07776
      Location:2 → 78
      zf-AD; Zinc-finger associated domain (zf-AD)

    2. NM_001299659.1 → NP_001286588.1  uncharacterized protein Dmel_CG15073, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286588.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LG07, Q8SYU8
      Conserved Domains (3) summary
      sd00017
      Location:408 → 429
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07776
      Location:2 → 78
      zf-AD; Zinc-finger associated domain (zf-AD)
      pfam13465
      Location:450 → 474
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LG07 A0A0B4LG07
    A1ZBC5 A1ZBC5
    Q8SYU8 Q8SYU8

    Gene LinkOut

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