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    karr karr [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 50257, updated on 18-Sep-2024

    Summary

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    Official Symbol
    karrprovided by FlyBase
    Official Full Name
    karrprovided by FlyBase
    Primary source
    FLYBASE:FBgn0040784
    Locus tag
    Dmel_CG15323
    See related
    AllianceGenome:FB:FBgn0040784
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15323; Dmel\CG15323
    Orthologs
    all
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    Genomic context

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    See karr in Genome Data Viewer
    Location:
    19B1-19B1; 1-64 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (20110110..20110575, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (20004143..20004608, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Odorant receptor 19b Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel genes derived from noncoding DNA in Drosophila melanogaster are frequently X-linked and exhibit testis-biased expression. Levine MT, et al. Proc Natl Acad Sci U S A, 2006 Jun 27. PMID 16777968, Free PMC Article
    2. On the origin of new genes in Drosophila. Zhou Q, et al. Genome Res, 2008 Sep. PMID 18550802, Free PMC Article
    3. Two rapidly evolving genes contribute to male fitness in Drosophila. Reinhardt JA, et al. J Mol Evol, 2013 Dec. PMID 24221639, Free PMC Article
    4. TATA and paused promoters active in differentiated tissues have distinct expression characteristics. Ramalingam V, et al. Mol Syst Biol, 2021 Feb. PMID 33543829, Free PMC Article
    5. Gene expression in a Drosophila model of mitochondrial disease. Fernández-Ayala DJ, et al. PLoS One, 2010 Jan 6. PMID 20066047, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    karr
    Names
    CG15323-PA
    karr-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      20110110..20110575 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_144149.3 → NP_652406.1  karr [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_652406.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      E2QDA1, Q14WF1
      Related
      FBpp0290787
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    E2QDA1 E2QDA1
    Q14WF1 Q14WF1
    Q14WF3 Q14WF3

    Gene LinkOut

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