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    CG6479 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39930, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG6479provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036710
    Locus tag
    Dmel_CG6479
    See related
    AllianceGenome:FB:FBgn0036710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG6479
    Summary
    Predicted to be active in membrane. Is expressed in adult head. Orthologous to human TMEM209 (transmembrane protein 209). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG6479 in Genome Data Viewer
    Location:
    74A5-74A5; 3-45 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17337172..17339262, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17330272..17332362, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR44563 Neighboring gene long non-coding RNA:CR44564 Neighboring gene transfer RNA:Proline-CGG 2-2 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of critical host mitochondrion-associated genes during Ehrlichia chaffeensis infections. Von Ohlen T, et al. Infect Immun, 2012 Oct. PMID 22851751, Free PMC Article
    2. Widespread colocalization of the Drosophila histone acetyltransferase homolog MYST5 with DREF and insulator proteins at active genes. Heseding C, et al. Chromosoma, 2017 Feb. PMID 26894919
    3. Stress-sensitive dynamics of miRNAs and Elba1 in Drosophila embryogenesis. Örkenby L, et al. Mol Syst Biol, 2023 May 9. PMID 36938679, Free PMC Article
    4. Identification of Drosophila gene products required for phagocytosis of Candida albicans. Stroschein-Stevenson SL, et al. PLoS Biol, 2006 Jan. PMID 16336044, Free PMC Article
    5. The genetic makeup of the Drosophila piRNA pathway. Handler D, et al. Mol Cell, 2013 Jun 6. PMID 23665231, Free PMC Article

    See all (27) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6479-PA
    CG6479-PB
    CG6479-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      17337172..17339262 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275052.1 → NP_001261981.1  uncharacterized protein Dmel_CG6479, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261981.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFY2, Q95SF0
      Conserved Domains (1) summary
      pfam09786
      Location:13 → 535
      CytochromB561_N; Cytochrome B561, N terminal

    2. NM_140711.3 → NP_648968.2  uncharacterized protein Dmel_CG6479, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648968.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95SF0, Q9VVF4
      Related
      FBpp0075006
      Conserved Domains (1) summary
      pfam09786
      Location:13 → 541
      CytochromB561_N; Cytochrome B561, N terminal

    3. NM_168723.2 → NP_730256.1  uncharacterized protein Dmel_CG6479, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730256.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IQQ8, Q95SF0
      Related
      FBpp0075007
      Conserved Domains (1) summary
      pfam09786
      Location:9 → 537
      CytochromB561_N; Cytochrome B561, N terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PFY2 M9PFY2
    Q8IQQ8 Q8IQQ8
    Q95SF0 Q95SF0
    Q9VVF4 Q9VVF4

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