U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG31441 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 326139, updated on 27-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG31441provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051441
    Locus tag
    Dmel_CG31441
    See related
    AllianceGenome:FB:FBgn0051441
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5135; Dmel\CG31441
    Summary
    Predicted to enable DNA-binding transcription factor activity; transcription cis-regulatory region binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is expressed in organism. Orthologous to human ZNF784 (zinc finger protein 784). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG31441 in Genome Data Viewer
    Location:
    86D8-86D8; 3-50 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11236286..11237624)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7062008..7063346)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Diphthamide biosynthesis 3 Neighboring gene Arfaptin Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene SCP-containing protein B Neighboring gene SCP-containing protein A

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genomic imprinting absent in Drosophila melanogaster adult females. Coolon JD, et al. Cell Rep, 2012 Jul 26. PMID 22840398, Free PMC Article
    2. Twenty-seven ZAD-ZNF genes of Drosophila melanogaster are orthologous to the embryo polarity determining mosquito gene cucoid. Li M, et al. PLoS One, 2023. PMID 36595500, Free PMC Article
    3. Sensory neuron lineage mapping and manipulation in the Drosophila olfactory system. Chai PC, et al. Nat Commun, 2019 Feb 7. PMID 30733440, Free PMC Article
    4. An RNA-interference screen in Drosophila to identify ZAD-containing C2H2 zinc finger genes that function in female germ cells. Shapiro-Kulnane L, et al. G3 (Bethesda), 2021 Jan 18. PMID 33561227, Free PMC Article
    5. ZAD-Domain Is Essential for Nuclear Localization of Insulator Proteins in Drosophila melanogaster. Zolotarev NA, et al. Acta Naturae, 2016 Jul-Sep. PMID 27795848, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables transcription cis-regulatory region binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG31441-PA
    CG31441-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11236286..11237624
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300354.1 → NP_001287283.1  uncharacterized protein Dmel_CG31441, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287283.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4LI36

    2. NM_169382.2 → NP_731558.1  uncharacterized protein Dmel_CG31441, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731558.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95RJ5, Q9VGQ6
      Related
      FBpp0081831
      Conserved Domains (5) summary
      COG5048
      Location:174 → 337
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:253 → 273
      ZF_C2H2; C2H2 Zn finger [structural motif]
      sd00019
      Location:197 → 217
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam07776
      Location:7 → 82
      zf-AD; Zinc-finger associated domain (zf-AD)
      pfam13465
      Location:268 → 290
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4LI36 A0A0B4LI36
    Q9VGQ6 Q9VGQ6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous