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    pyoS5 pyocin S5 [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 877569, updated on 24-Aug-2024

    Summary

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    Gene symbol
    pyoS5
    Gene description
    pyocin S5
    Locus tag
    PA0985
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1066321..1067817, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene colicin immunity protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pyocin S5 Import into Pseudomonas aeruginosa Reveals a Generic Mode of Bacteriocin Transport. Behrens HM, et al. mBio, 2020 Mar 10. PMID 32156826, Free PMC Article
    2. A predicted immunity protein confers resistance to pyocin S5 in a sensitive strain of Pseudomonas aeruginosa. Rasouliha BH, et al. Chembiochem, 2013 Dec 16. PMID 24222552
    3. Pore-forming pyocin S5 utilizes the FptA ferripyochelin receptor to kill Pseudomonas aeruginosa. Elfarash A, et al. Microbiology (Reading), 2014 Feb. PMID 24217175
    4. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    5. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Pyocin S5 Import into Pseudomonas aeruginosa Reveals a Generic Mode of Bacteriocin Transport.
      Title: Pyocin S5 Import into Pseudomonas aeruginosa Reveals a Generic Mode of Bacteriocin Transport.
    2. Complementation of an fptA transposon mutant with the Pseudomonas aeruginosa fptA gene in trans restored the sensitivity to pyocin S5.
      Title: Pore-forming pyocin S5 utilizes the FptA ferripyochelin receptor to kill Pseudomonas aeruginosa.
    3. Confirmed is the identity of the predicted pyocin S5 immunity gene (S5I) in P. aeruginosa PAO1.
      Title: A predicted immunity protein confers resistance to pyocin S5 in a sensitive strain of Pseudomonas aeruginosa.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    pyocin S5
    NP_249676.1
    • 'Product name confidence: class 2: Function of highly similar gene experimentally demonstrated in another organism (and gene context consistent in terms of pathways its involved in, if known).'

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1066321..1067817 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249676.1 pyocin S5 [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249676.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A9P1R2Z8
      Conserved Domains (2) summary
      pfam01024
      Location:310 → 494
      Colicin; Colicin pore forming domain
      cl25732
      Location:50 → 407
      SMC_N; RecF/RecN/SMC N terminal domain
    Nucleotide Protein
    Heading Accession and Version

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