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    potD polyamine ABC transporter substrate-binding protein PotD [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 880132, updated on 10-Oct-2024

    Summary

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    Gene symbol
    potD
    Gene description
    polyamine ABC transporter substrate-binding protein PotD
    Locus tag
    PA3610
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4043920..4044984)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene polyamine transporter ATP-binding protein PotA Neighboring gene polyamine ABC transporter permease PotB Neighboring gene polyamine ABC transporter permease PotC Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characteristics of the operon for a putrescine transport system that maps at 19 minutes on the Escherichia coli chromosome. Pistocchi R, et al. J Biol Chem, 1993 Jan 5. PMID 8416922
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within putrescine transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polyamine ABC transporter substrate-binding protein PotD
    NP_252300.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4043920..4044984
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252300.1 polyamine ABC transporter substrate-binding protein PotD [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252300.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0C7ALG1
      Conserved Domains (1) summary
      cd13590
      Location:24 → 348
      PBP2_PotD_PotF_like; The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9HY16.1

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