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    LOC1274911 peptidoglycan-recognition protein LA [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1274911, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC1274911
    Gene description
    peptidoglycan-recognition protein LA
    See related
    VectorBase:AGAMI1_000249
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    PGRPLA; AGAP005205
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    Genomic context

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    See LOC1274911 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (81103881..81114543, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene SOSS complex subunit B homolog Neighboring gene RING-box protein 1A Neighboring gene peptidoglycan-recognition protein LC Neighboring gene uncharacterized LOC3289920 Neighboring gene SCY1-like protein bma Neighboring gene general odorant-binding protein 72-like Neighboring gene lethal (2) k01209

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables N-acetylmuramoyl-L-alanine amidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidoglycan catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidoglycan-recognition protein LA
    Names
    AGAP005205-PA
    AGAP005205-PC
    peptidoglycan recognition protein (long)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      81103881..81114543 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061644960.1 → XP_061500944.1  peptidoglycan-recognition protein LA isoform X2

    2. XM_061644961.1 → XP_061500945.1  peptidoglycan-recognition protein LA isoform X3

    3. XM_061644959.1 → XP_061500943.1  peptidoglycan-recognition protein LA isoform X1

      UniProtKB/TrEMBL
      A0A1S4GP80

    4. XM_061644962.1 → XP_061500946.1  peptidoglycan-recognition protein LA isoform X4

      UniProtKB/TrEMBL
      A0A2Y9D1X5

    5. XM_061644963.1 → XP_061500947.1  peptidoglycan-recognition protein LA isoform X5

      UniProtKB/TrEMBL
      A0A2Y9D1X5
    Nucleotide Protein Strain
    Heading Accession and Version

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