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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001382306.1 → NP_001369235.1 leukocyte surface antigen CD47 isoform 3 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame alternate coding exon compared to variant t. The encoded isoform (2) has a shorter C-terminus compared to isoform 1.
- Source sequence(s)
-
AC012020
- Conserved Domains (2) summary
-
- pfam04549
Location:144 → 292
- CD47; CD47 transmembrane region
- cd16090
Location:20 → 133
- IgV_CD47; Immunoglobulin variable region (IgV) in Cluster of Differentiation (CD) 47
-
NM_001777.4 → NP_001768.1 leukocyte surface antigen CD47 isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC012020, CB995865, X69398
- Consensus CDS
-
CCDS43126.1
- UniProtKB/Swiss-Prot
- A8K198, D3DN59, Q08722, Q53Y71, Q96A60
- Related
- ENSP00000355361.5, ENST00000361309.6
- Conserved Domains (2) summary
-
- pfam04549
Location:144 → 292
- CD47; CD47 transmembrane region
- pfam08204
Location:20 → 131
- V-set_CD47; CD47 immunoglobulin-like domain
-
NM_198793.3 → NP_942088.1 leukocyte surface antigen CD47 isoform 2 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks two alternate coding exons compared to variant 1, resulting in a frameshift. The encoded isoform (2) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC012020, BC037306, CB995865
- Consensus CDS
-
CCDS43125.1
- UniProtKB/Swiss-Prot
-
Q08722
- Related
- ENSP00000347512.7, ENST00000355354.13
- Conserved Domains (2) summary
-
- pfam04549
Location:144 → 292
- CD47; CD47 transmembrane region
- pfam08204
Location:20 → 131
- V-set_CD47; CD47 immunoglobulin-like domain
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001025079.1: Suppressed sequence
- Description
- NM_001025079.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.
-
NM_001025080.1: Suppressed sequence
- Description
- NM_001025080.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate and lacks homolog support.