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    rpoH RNA polymerase sigma factor RpoH [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 883126, updated on 11-Sep-2024

    Summary

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    Gene symbol
    rpoH
    Gene description
    RNA polymerase sigma factor RpoH
    Locus tag
    PA0376
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (420683..421537)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene signal recognition particle receptor FtsY Neighboring gene cell division protein FtsE Neighboring gene cell division protein FtsX Neighboring gene hypothetical protein Neighboring gene monofunctional biosynthetic peptidoglycan transglycosylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and primary sequence of the rpoH gene from Pseudomonas aeruginosa. Benvenisti L, et al. Gene, 1995 Mar 21. PMID 7698670
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase sigma factor RpoH
    NP_249067.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      420683..421537
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_249067.1 RNA polymerase sigma factor RpoH [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_249067.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P42378
      Conserved Domains (1) summary
      PRK06596
      Location:1 → 284
      PRK06596; RNA polymerase factor sigma-32; Reviewed
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P42378.2

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