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    pscP translocation protein in type III secretion [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 883100, updated on 24-Aug-2024

    Summary

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    Gene symbol
    pscP
    Gene description
    translocation protein in type III secretion
    Locus tag
    PA1695
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (1844144..1845253, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene translocation protein in type III secretion Neighboring gene translocation protein in type III secretion Neighboring gene type III secretion system protein Neighboring gene type III secretion system protein Neighboring gene translocation protein in type III secretion Neighboring gene type III secretion system ATPase Neighboring gene type III secretion outer membrane protein PopN Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Structure of a Type 3 Secretion System (T3SS) Ruler Protein Suggests a Molecular Mechanism for Needle Length Sensing. Bergeron JRC, et al. J Biol Chem, 2016 Jan 22. PMID 26589798, Free PMC Article
    2. YscP of Yersinia pestis is a secreted component of the Yop secretion system. Payne PL, et al. J Bacteriol, 1999 May. PMID 10217778, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within protein secretion by the type III secretion system ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    translocation protein in type III secretion
    NP_250386.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      1844144..1845253 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_250386.1 translocation protein in type III secretion [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_250386.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9I332
      Conserved Domains (2) summary
      PTZ00249
      Location:133 → 238
      PTZ00249; variable surface protein Vir28; Provisional
      TIGR02514
      Location:240 → 369
      type_III_yscP; type III secretion system needle length determinant
    Nucleotide Protein
    Heading Accession and Version

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