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    ptrA repressor PtrA [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 878671, updated on 24-Aug-2024

    Summary

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    Gene symbol
    ptrA
    Gene description
    repressor PtrA
    Locus tag
    PA2808
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (3162388..3162579, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene 7-cyano-7-deazaguanine reductase Neighboring gene hypothetical protein Neighboring gene two-component response regulator CopR Neighboring gene two-component sensor CopS Neighboring gene ABC transporter permease Neighboring gene ABC transporter ATP-binding protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PtrA is a periplasmic protein involved in Cu tolerance in Pseudomonas aeruginosa. Elsen S, et al. J Bacteriol, 2011 Jul. PMID 21531801, Free PMC Article
    2. An in vivo inducible gene of Pseudomonas aeruginosa encodes an anti-ExsA to suppress the type III secretion system. Ha UH, et al. Mol Microbiol, 2004 Oct. PMID 15469505
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of protein secretion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within stress response to copper ion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    repressor PtrA
    NP_251498.1
    • class 1: Function experimentally demonstrated in P. aeruginosa

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      3162388..3162579 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_251498.1 repressor PtrA [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_251498.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A367LZQ2
    Nucleotide Protein
    Heading Accession and Version

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