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    rpoC DNA-directed RNA polymerase subunit beta' [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 881710, updated on 11-Sep-2024

    Summary

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    Gene symbol
    rpoC
    Gene description
    DNA-directed RNA polymerase subunit beta'
    Locus tag
    PA4269
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (4772279..4776478, complement)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene 30S ribosomal protein S7 Neighboring gene 30S ribosomal protein S12 Neighboring gene DNA-directed RNA polymerase subunit beta Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The primary structure of E. coli RNA polymerase, Nucleotide sequence of the rpoC gene and amino acid sequence of the beta'-subunit. Ovchinnikov YuA, et al. Nucleic Acids Res, 1982 Jul 10. PMID 6287430, Free PMC Article
    2. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    3. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    4. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article
    5. A cystic fibrosis epidemic strain of Pseudomonas aeruginosa displays enhanced virulence and antimicrobial resistance. Salunkhe P, et al. J Bacteriol, 2005 Jul. PMID 15995206, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerase subunit beta'
    NP_252959.1
    • Product name confidence: class 2 (High similarity to functionally studied protein)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      4772279..4776478 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252959.1 DNA-directed RNA polymerase subunit beta' [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252959.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9HWC9
      Conserved Domains (1) summary
      PRK00566
      Location:16 → 1374
      PRK00566; DNA-directed RNA polymerase subunit beta'; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9HWC9.1

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