Fam209 family with sequence similarity 209 [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Fam209provided by RGD
Official Full Name: family with sequence similarity 209provided by RGD
Primary source: RGD:1307805
See related: EnsemblRapid:ENSRNOG00000005235 AllianceGenome:RGD:1307805
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Fam209a; RGD1307805
Summary: Predicted to be involved in acrosome assembly. Predicted to be located in nuclear inner membrane. Orthologous to several human genes including FAM209B (family with sequence similarity 209 member B). [provided by Alliance of Genome Resources, Nov 2024]
Expression: Restricted expression toward (RPKM 284.5) See more
Orthologs: human all
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Genomic context

Location:: 3q42

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	3	NC_086021.1 (181658479..181660164)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	3	NC_051338.1 (161240062..161241747)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	3	NC_005102.4 (170475831..170477516)

Chromosome 3 - NC_086021.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in acrosome assembly	ISO Inferred from Sequence Orthology more info
involved_in spermatid development	ISO Inferred from Sequence Orthology more info

Component	Evidence Code	Pubs
located_in nuclear inner membrane	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: family with sequence similarity 209

Names: family with sequence similarity 209 member B; family with sequence similarity 209, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.