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    Aladin aladin [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31881, updated on 9-Dec-2024

    Summary

    Official Symbol
    Aladinprovided by FlyBase
    Official Full Name
    aladinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030122
    Locus tag
    Dmel_CG16892
    See related
    AllianceGenome:FB:FBgn0030122
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    aladin; ALADIN; CG16892; Dmel\CG16892
    Summary
    Involved in microtubule bundle formation; mitotic spindle assembly; and positive regulation of protein localization to spindle pole body. Located in mitotic spindle and spindle pole. Is expressed in adult head. Human ortholog(s) of this gene implicated in achalasia and triple-A syndrome. Orthologous to human AAAS (aladin WD repeat nucleoporin). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Aladin in Genome Data Viewer
    Location:
    8D4-8D4; 1-27 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (9273413..9275653)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (9167446..9169686)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene CXXC finger protein 1 Neighboring gene c11.1 Neighboring gene lozenge Neighboring gene long non-coding RNA:CR44534

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in microtubule bundle formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mitotic spindle assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in nucleocytoplasmic transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in nucleocytoplasmic transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in positive regulation of protein localization to spindle pole body IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in endomembrane system HDA PubMed 
    located_in mitotic spindle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of nuclear pore IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of nuclear pore ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in spindle pole IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    aladin
    Names
    Aladin-PA
    Aladin-PB
    CG16892-PA
    CG16892-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      9273413..9275653
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298120.1NP_001285049.1  aladin, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285049.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W351
      Conserved Domains (2) summary
      COG2319
      Location:130420
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:184227
      7WD40; WD40 repeat [structural motif]
    2. NM_132329.4NP_572557.1  aladin, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_572557.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9W351
      Related
      FBpp0071254
      Conserved Domains (2) summary
      COG2319
      Location:130420
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:184227
      7WD40; WD40 repeat [structural motif]