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    Gm29680 predicted gene, 29680 [ Mus musculus (house mouse) ]

    Gene ID: 544960, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Gm29680provided by MGI
    Official Full Name
    predicted gene, 29680provided by MGI
    Primary source
    MGI:MGI:5588839
    See related
    Ensembl:ENSMUSG00000114541 AllianceGenome:MGI:5588839
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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    Genomic context

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    See Gm29680 in Genome Data Viewer
    Location:
    13; 13 C3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (90327336..90365261, complement)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene transmembrane protein 167 Neighboring gene predicted gene, 24507 Neighboring gene STARR-seq mESC enhancer starr_35230 Neighboring gene predicted gene, 41013 Neighboring gene STARR-seq mESC enhancer starr_35234 Neighboring gene STARR-seq mESC enhancer starr_35235 Neighboring gene STARR-seq mESC enhancer starr_35236 Neighboring gene STARR-seq mESC enhancer starr_35237 Neighboring gene STARR-seq mESC enhancer starr_35238 Neighboring gene predicted gene, 35111 Neighboring gene STARR-seq mESC enhancer starr_35240 Neighboring gene STARR-seq mESC enhancer starr_35241 Neighboring gene STARR-seq mESC enhancer starr_35242 Neighboring gene STARR-seq mESC enhancer starr_35243 Neighboring gene STARR-seq mESC enhancer starr_35244 Neighboring gene crumbs homolog 1 pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000079.7 Chromosome 13 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
    5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_188857.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC155234
      Related
      ENSMUST00000225610.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      90327336..90365261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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