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    1700016C19Rik RIKEN cDNA 1700016C19 gene [ Mus musculus (house mouse) ]

    Gene ID: 74228, updated on 17-Aug-2024

    Summary

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    Official Symbol
    1700016C19Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700016C19 geneprovided by MGI
    Primary source
    MGI:MGI:1921478
    See related
    AllianceGenome:MGI:1921478
    Gene type
    unknown
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Restricted expression toward testis adult (RPKM 7.5) See more

    Genomic context

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    See 1700016C19Rik in Genome Data Viewer
    Location:
    5; 5 F
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (113497758..113504989)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (113349892..113357123)

    Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_14032 Neighboring gene microRNA 7229 Neighboring gene microRNA 7230 Neighboring gene activator of yeast meiotic promoters 1 Neighboring gene STARR-seq mESC enhancer starr_14038 Neighboring gene STARR-seq mESC enhancer starr_14039 Neighboring gene STARR-seq mESC enhancer starr_14040 Neighboring gene predicted gene, 30812

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Characterization of the piRNA complex from rat testes. Lau NC, et al. Science, 2006 Jul 21. PMID 16778019
    2. A germline-specific class of small RNAs binds mammalian Piwi proteins. Girard A, et al. Nature, 2006 Jul 13. PMID 16751776
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000071.7 Reference GRCm39 C57BL/6J

      Range
      113497758..113504989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_003955973.1 RNA Sequence

    2. XR_003955968.1 RNA Sequence

    3. XR_880601.3 RNA Sequence

    4. XR_003955967.1 RNA Sequence

    5. XR_003955969.1 RNA Sequence

    6. XR_003955972.1 RNA Sequence

    7. XR_003955970.1 RNA Sequence

    8. XR_003955971.1 RNA Sequence

    9. XR_880605.3 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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