U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG2926 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40676, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG2926provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037344
    Locus tag
    Dmel_CG2926
    See related
    AllianceGenome:FB:FBgn0037344
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    3R44; Dmel\CG2926
    Summary
    Predicted to enable zinc ion binding activity. Involved in regulation of alternative mRNA splicing, via spliceosome. Predicted to be located in nucleus. Orthologous to human PHRF1 (PHD and ring finger domains 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG2926 in Genome Data Viewer
    Location:
    83B2-83B4; 3-47.5 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (5579301..5588380, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (1405023..1414102, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Ras homolog enriched in brain Neighboring gene Collapsin Response Mediator Protein Neighboring gene small Cajal body-specific RNA : MeU4:25F-C137 Neighboring gene DNA polymerase zeta subunit 2 Neighboring gene noisette Neighboring gene Vacuolar H[+]-ATPase 26kD subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A novel role of the glial fate determinant glial cells missing in hematopoiesis. Jacques C, et al. Int J Dev Biol, 2009. PMID 19598118
    2. The PHD finger, a nuclear protein-interaction domain. Bienz M. Trends Biochem Sci, 2006 Jan. PMID 16297627
    3. Identification of alternative splicing regulators by RNA interference in Drosophila. Park JW, et al. Proc Natl Acad Sci U S A, 2004 Nov 9. PMID 15492211, Free PMC Article
    4. Sex-specific expression of alternative transcripts in Drosophila. McIntyre LM, et al. Genome Biol, 2006. PMID 16934145, Free PMC Article
    5. Striking circadian neuron diversity and cycling of Drosophila alternative splicing. Wang Q, et al. Elife, 2018 Jun 4. PMID 29863472, Free PMC Article

    See all (35) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables zinc ion binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of alternative mRNA splicing, via spliceosome HMP PubMed 
    Component Evidence Code Pubs
    located_in nucleus IC
    Inferred by Curator
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG2926-PA
    CG2926-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      5579301..5588380 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141297.3 → NP_649554.1  uncharacterized protein Dmel_CG2926, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649554.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VNE0
      Related
      FBpp0078401
      Conserved Domains (2) summary
      cd15536
      Location:246 → 291
      PHD_PHRF1; PHD finger found in PHD and RING finger domain-containing protein 1 (PHRF1)
      pfam13639
      Location:155 → 196
      zf-RING_2; Ring finger domain

    2. NM_001275360.1 → NP_001262289.1  uncharacterized protein Dmel_CG2926, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262289.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KF97
      Conserved Domains (3) summary
      cd15536
      Location:246 → 291
      PHD_PHRF1; PHD finger found in PHD and RING finger domain-containing protein 1 (PHRF1)
      pfam08648
      Location:35 → 122
      DUF1777; Protein of unknown function (DUF1777)
      pfam13639
      Location:155 → 196
      zf-RING_2; Ring finger domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KF97 A0A0B4KF97
    Q6NP07 Q6NP07
    Q9VNE0 Q9VNE0

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools