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    Cp38 Chorion protein 38 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 31788, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Cp38provided by FlyBase
    Official Full Name
    Chorion protein 38provided by FlyBase
    Primary source
    FLYBASE:FBgn0000360
    Locus tag
    Dmel_CG11213
    See related
    AllianceGenome:FB:FBgn0000360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    ACE1; CG11213; cp38; CP38; Dmel\CG11213; Dms38; E3; s38; S38; s38-1
    Summary
    A structural constituent of egg chorion. Involved in chorion-containing eggshell formation. Located in egg chorion. Is expressed in adult heart; follicle cell; and ovary. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Cp38 in Genome Data Viewer
    Location:
    7F1-7F1; 1-23 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (8481837..8483311)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (8375870..8377344)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Chorion protein c at 7F Neighboring gene long non-coding RNA:CR43834 Neighboring gene Chorion protein 36 Neighboring gene ovarian tumor Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and genetic localization of mRNAs from ovarian follicle cells of Drosophila melanogaster. Spradling AC, et al. Cell, 1979 Mar. PMID 110453
    2. Structural and functional features of Drosophila chorion proteins s36 and s38 from analysis of primary structure and infrared spectroscopy. Hamodrakas SJ, et al. Int J Biol Macromol, 1989 Oct. PMID 2489096
    3. Two Drosophila chorion genes terminate transcription in discrete regions near their poly(A) sites. Osheim YN, et al. EMBO J, 1986 Dec 20. PMID 3104029, Free PMC Article
    4. RNP particles at splice junction sequences on Drosophila chorion transcripts. Osheim YN, et al. Cell, 1985 Nov. PMID 3935315
    5. Amplification of genes for chorion proteins during oogenesis in Drosophila melanogaster. Spradling AC, et al. Proc Natl Acad Sci U S A, 1980 Feb. PMID 6767241, Free PMC Article

    See all (69) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. s38 loss may sensitize choriogenesis to stochastic variation in its coordination and timing.
      Title: The indispensable contribution of s38 protein to ovarian-eggshell morphogenesis in Drosophila melanogaster.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of egg chorion IC
    Inferred by Curator
    more info
    		 PubMed 
    enables structural constituent of egg chorion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chorion-containing eggshell formation IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in chorion-containing eggshell formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in egg chorion IC
    Inferred by Curator
    more info
    		 PubMed 
    located_in egg chorion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chorion protein 38
    Names
    CG11213-PA
    CG11213-PB
    Cp38-PA
    Cp38-PB
    Shell-38
    chorion prot 38

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      8481837..8483311
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001169232.1 → NP_001162703.1  chorion protein 38, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001162703.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4ULY8, A9UN49, A9UN60, E1JJF7, P07183, Q9W3E5
      UniProtKB/TrEMBL
      B3DNA9
      Conserved Domains (1) summary
      pfam05387
      Location:75 → 198
      Chorion_3; Chorion family 3

    2. NM_078533.2 → NP_511088.1  chorion protein 38, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_511088.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4ULY8, A9UN49, A9UN60, E1JJF7, P07183, Q9W3E5
      UniProtKB/TrEMBL
      B3DNA9
      Related
      FBpp0071151
      Conserved Domains (1) summary
      pfam05387
      Location:75 → 198
      Chorion_3; Chorion family 3
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P07183.1 P07183

    Gene LinkOut

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