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    CG15916 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32549, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG15916provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0030704
    Locus tag
    Dmel_CG15916
    See related
    AllianceGenome:FB:FBgn0030704
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH08992; Dmel\CG15916
    Summary
    Predicted to be involved in rRNA processing. Is expressed in organism. Orthologous to human RBFA (ribosome binding factor A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG15916 in Genome Data Viewer
    Location:
    13F17-13F17; 1-52 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (15890589..15891547)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (15784622..15785580)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene tay bridge Neighboring gene membrane steroid binding protein Neighboring gene shibire Neighboring gene Cyclin D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. Molnar C, et al. Genetics, 2006 Nov. PMID 16980395, Free PMC Article
    2. Genes conserved in bilaterians but jointly lost with Myc during nematode evolution are enriched in cell proliferation and cell migration functions. Erives AJ. Dev Genes Evol, 2015 Sep. PMID 26173873, Free PMC Article
    3. CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 Drosophila genes conserved in humans. Wei P, et al. Genome Res, 2020 Jan. PMID 31722958, Free PMC Article
    4. A global in vivo Drosophila RNAi screen identifies NOT3 as a conserved regulator of heart function. Neely GG, et al. Cell, 2010 Apr 2. PMID 20371351, Free PMC Article
    5. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15916-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      15890589..15891547
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_132860.4 → NP_573088.1  uncharacterized protein Dmel_CG15916 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_573088.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SXX0, Q9VXM3
      Related
      FBpp0073927
      Conserved Domains (1) summary
      pfam02033
      Location:95 → 188
      RBFA; Ribosome-binding factor A
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SXX0 Q8SXX0

    Gene LinkOut

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