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    CG6441 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34029, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG6441provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031920
    Locus tag
    Dmel_CG6441
    See related
    AllianceGenome:FB:FBgn0031920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.45; Dmel\CG6441
    Orthologs
    all
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    Genomic context

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    See CG6441 in Genome Data Viewer
    Location:
    28A1-28A1; 2-27 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (7474704..7476952)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (7474704..7476952)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Gustatory receptor 28b Neighboring gene uncharacterized protein Neighboring gene Zizimin Neighboring gene Rap GTPase activating protein 1 Neighboring gene Odorant-binding protein 28a Neighboring gene long non-coding RNA:CR44082

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular evidence for increased regulatory conservation during metamorphosis, and against deleterious cascading effects of hybrid breakdown in Drosophila. Artieri CG, et al. BMC Biol, 2010 Mar 31. PMID 20356354, Free PMC Article
    2. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
    3. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG6441-PA
    CG6441-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      7474704..7476952
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135280.4 → NP_609124.3  uncharacterized protein Dmel_CG6441, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609124.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VM05, W8P2I4
      Conserved Domains (1) summary
      pfam07145
      Location:30 → 45
      PAM2; Ataxin-2 C-terminal region

    2. NM_164753.3 → NP_723282.3  uncharacterized protein Dmel_CG6441, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723282.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8WHD6, Q8IPI0
      Conserved Domains (1) summary
      pfam07145
      Location:30 → 45
      PAM2; Ataxin-2 C-terminal region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IPI0 Q8IPI0
    Q8T482 Q8T482
    Q9VM05 Q9VM05

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