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    CG8197 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35912, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG8197provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033369
    Locus tag
    Dmel_CG8197
    See related
    AllianceGenome:FB:FBgn0033369
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8197
    Summary
    Orthologous to human LRRC34 (leucine rich repeat containing 34). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG8197 in Genome Data Viewer
    Location:
    45A1-45A1; 2-60 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (9060461..9061924, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (4947966..4949429, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Ance-4 Neighboring gene Prophenoloxidase 2 Neighboring gene uncharacterized protein Neighboring gene anachronism Neighboring gene antisense RNA:CR45924 Neighboring gene Concentrative nucleoside transporter 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Drosophila Translational Control Element (TCE) is required for high-level transcription of many genes that are specifically expressed in testes. Katzenberger RJ, et al. PLoS One, 2012. PMID 22984601, Free PMC Article
    2. TRF4, the novel TBP-related protein of Drosophila melanogaster, is concentrated at the endoplasmic reticulum and copurifies with proteins participating in the processes associated with endoplasmic reticulum. Kurshakova MM, et al. J Cell Biochem, 2019 May. PMID 30426565
    3. Amyloid fibril proteomics of AD brains reveals modifiers of aggregation and toxicity. Upadhyay A, et al. Mol Neurodegener, 2023 Sep 14. PMID 37710351, Free PMC Article
    4. Decoding cilia function: defining specialized genes required for compartmentalized cilia biogenesis. Avidor-Reiss T, et al. Cell, 2004 May 14. PMID 15137945
    5. Genome-wide analysis of self-renewal in Drosophila neural stem cells by transgenic RNAi. Neumüller RA, et al. Cell Stem Cell, 2011 May 6. PMID 21549331, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8197-PA
    CG8197-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      9060461..9061924 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299296.1 → NP_001286225.1  uncharacterized protein Dmel_CG8197, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286225.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z7N0, Q6NL35
      Conserved Domains (3) summary
      cd00116
      Location:137 → 374
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:202 → 220
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:134 → 161
      LRR_AMN1; leucine-rich repeat [structural motif]

    2. NM_136601.2 → NP_610445.1  uncharacterized protein Dmel_CG8197, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610445.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z7N0, Q6NL35
      Related
      FBpp0087742
      Conserved Domains (3) summary
      cd00116
      Location:137 → 374
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:202 → 220
      LRR_RI; leucine-rich repeat [structural motif]
      sd00034
      Location:134 → 161
      LRR_AMN1; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z7N0 A1Z7N0

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