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    CG18231 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40026, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG18231provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036796
    Locus tag
    Dmel_CG18231
    See related
    AllianceGenome:FB:FBgn0036796
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG18231
    Summary
    Predicted to enable procollagen-proline 4-dioxygenase activity. Predicted to be active in endoplasmic reticulum. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG18231 in Genome Data Viewer
    Location:
    75D4-75D4; 3-45 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (18607462..18609512)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (18600562..18602612)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Invadolysin acts genetically via the SAGA complex to modulate chromosome structure. Rao SG, et al. Nucleic Acids Res, 2015 Apr 20. PMID 25779050, Free PMC Article
    2. Normal dynactin complex function during synapse growth in Drosophila requires membrane binding by Arfaptin. Chang L, et al. Mol Biol Cell, 2013 Jun. PMID 23596322, Free PMC Article
    3. Gepoclu: a software tool for identifying and analyzing gene positional clusters in large-scale gene expression analysis. Dottorini T, et al. BMC Bioinformatics, 2011 Jan 26. PMID 21269436, Free PMC Article
    4. Use of mutagenesis, genetic mapping and next generation transcriptomics to investigate insecticide resistance mechanisms. Kalajdzic P, et al. PLoS One, 2012. PMID 22768270, Free PMC Article
    5. Cold acclimation wholly reorganizes the Drosophila melanogaster transcriptome and metabolome. MacMillan HA, et al. Sci Rep, 2016 Jun 30. PMID 27357258, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables procollagen-proline 4-dioxygenase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables procollagen-proline 4-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG18231-PB
    NP_649045.2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      18607462..18609512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140788.2 → NP_649045.2  uncharacterized protein Dmel_CG18231 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649045.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q4V5K8, Q9VVQ7
      Conserved Domains (2) summary
      pfam08336
      Location:19 → 148
      P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
      cl21496
      Location:322 → 449
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VVQ7 Q9VVQ7

    Gene LinkOut

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