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    Ravus ravus [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41626, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Ravusprovided by FlyBase
    Official Full Name
    ravusprovided by FlyBase
    Primary source
    FLYBASE:FBgn0038128
    Locus tag
    Dmel_CG15889
    See related
    AllianceGenome:FB:FBgn0038128
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG15889; Dmel\CG15889
    Summary
    Predicted to enable DNA binding activity. Located in chromatin. Is expressed in organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Ravus in Genome Data Viewer
    Location:
    87E3-87E3; 3-53 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (13262733..13264061, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (9088455..9089783, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Acetylcholine esterase Neighboring gene uncharacterized protein Neighboring gene Suppressor of variegation 3-7 Neighboring gene TBC1 domain family member 5 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new gene in Drosophila melanogaster, Ravus, the phantom of the modifier of position-effect variegation Su(var)3-7. Delattre M, et al. Int J Dev Biol, 2002 Jan. PMID 11902679
    2. The BET protein FSH functionally interacts with ASH1 to orchestrate global gene activity in Drosophila. Kockmann T, et al. Genome Biol, 2013 Feb 25. PMID 23442797, Free PMC Article
    3. Dynamics of Dark-Fly Genome Under Environmental Selections. Izutsu M, et al. G3 (Bethesda), 2015 Dec 4. PMID 26637434, Free PMC Article
    4. Inhibitory activities of short linear motifs underlie Hox interactome specificity in vivo. Baëza M, et al. Elife, 2015 Apr 14. PMID 25869471, Free PMC Article
    5. Generation of a versatile BiFC ORFeome library for analyzing protein-protein interactions in live Drosophila. Bischof J, et al. Elife, 2018 Sep 24. PMID 30247122, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Ravus cloning and expression in Drosophila
      Title: A new gene in Drosophila melanogaster, Ravus, the phantom of the modifier of position-effect variegation Su(var)3-7.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chromatin IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ravus
    Names
    CG15889-PA
    Ravus-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      13262733..13264061 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_169498.3 → NP_731779.1  ravus [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731779.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VFX8
      Related
      FBpp0082247
      Conserved Domains (1) summary
      pfam02944
      Location:278 → 312
      BESS; BESS motif
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MRD3 Q8MRD3
    Q9VFX8 Q9VFX8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
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