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    Cpr72Ec Cuticular protein 72Ec [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39816, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Cpr72Ecprovided by FlyBase
    Official Full Name
    Cuticular protein 72Ecprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036619
    Locus tag
    Dmel_CG4784
    See related
    AllianceGenome:FB:FBgn0036619
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG4784; CT15377; Dmel\CG4784
    Summary
    A structural constituent of eye lens. Predicted to be involved in chitin-based cuticle development. Predicted to be located in chitin-based extracellular matrix and extracellular space. Predicted to be active in extracellular matrix. Is expressed in adult head; eye; photoreceptor neurons; and sensory organ cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Cpr72Ec in Genome Data Viewer
    Location:
    72E2-72E2; 3-44 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (16365894..16367340, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (16358994..16360440, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Cuticular protein 72Ea Neighboring gene Cuticular protein 72Eb Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene roquin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The cuticular nature of corneal lenses in Drosophila melanogaster. Stahl AL, et al. Dev Genes Evol, 2017 Jul. PMID 28477155, Free PMC Article
    2. A Drosophila metallophosphoesterase mediates deglycosylation of rhodopsin. Cao J, et al. EMBO J, 2011 Jul 29. PMID 21804530, Free PMC Article
    3. Nascent-Seq analysis of Drosophila cycling gene expression. Rodriguez J, et al. Proc Natl Acad Sci U S A, 2013 Jan 22. PMID 23297234, Free PMC Article
    4. Reverse and forward engineering of Drosophila corneal nanocoatings. Kryuchkov M, et al. Nature, 2020 Sep. PMID 32939070
    5. Rapid genomic changes in Drosophila melanogaster adapting to desiccation stress in an experimental evolution system. Kang L, et al. BMC Genomics, 2016 Mar 15. PMID 26979755, Free PMC Article

    See all (52) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables structural constituent of chitin-based larval cuticle ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables structural constituent of eye lens IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chitin-based cuticle development ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    is_active_in extracellular matrix IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in extracellular space ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cuticular protein 72Ec
    Names
    CG4784-PA
    Cpr72Ec-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      16365894..16367340 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140627.3 → NP_648884.1  cuticular protein 72Ec [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648884.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VV46
      Related
      FBpp0075182
      Conserved Domains (1) summary
      pfam00379
      Location:39 → 82
      Chitin_bind_4; Insect cuticle protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VV46 Q9VV46

    Gene LinkOut

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