U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    bip1 bip1 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38891, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    bip1provided by FlyBase
    Official Full Name
    bip1provided by FlyBase
    Primary source
    FLYBASE:FBgn0026263
    Locus tag
    Dmel_CG7574
    See related
    AllianceGenome:FB:FBgn0026263
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.246; bip-I; Bip1; CG7574; Dmel\CG7574
    Summary
    Involved in larval lymph gland hemopoiesis. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See bip1 in Genome Data Viewer
    Location:
    66B3-66B3; 3-22 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (8054333..8058713, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (8047433..8051813, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene POP4 ribonuclease P/MRP subunit Neighboring gene nemo Neighboring gene transfer RNA:Alanine-AGC 2-1 Neighboring gene transfer RNA:Leucine-CAG 1-2 Neighboring gene transfer RNA:Leucine-CAG 1-3 Neighboring gene antisense RNA:CR45867 Neighboring gene antisense RNA:CR45868

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The BTB/POZ domain of the regulatory proteins Bric à brac 1 (BAB1) and Bric à brac 2 (BAB2) interacts with the novel Drosophila TAF(II) factor BIP2/dTAF(II)155. Pointud JC, et al. Dev Biol, 2001 Sep 15. PMID 11543621
    2. Sudestada1, a Drosophila ribosomal prolyl-hydroxylase required for mRNA translation, cell homeostasis, and organ growth. Katz MJ, et al. Proc Natl Acad Sci U S A, 2014 Mar 18. PMID 24550463, Free PMC Article
    3. Two distinct waves of transcriptome and translatome changes drive Drosophila germline stem cell differentiation. Samuels TJ, et al. EMBO J, 2024 Apr. PMID 38480936, Free PMC Article
    4. Pvr expression regulators in equilibrium signal control and maintenance of Drosophila blood progenitors. Mondal BC, et al. Elife, 2014 Sep 8. PMID 25201876, Free PMC Article
    5. Parallel genetic and proteomic screens identify Msps as a CLASP-Abl pathway interactor in Drosophila. Lowery LA, et al. Genetics, 2010 Aug. PMID 20498300, Free PMC Article

    See all (37) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in larval lymph gland hemopoiesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    bip1
    Names
    Bab interating protein 1
    CG7574-PA
    CG7574-PB
    bip1-PA
    bip1-PB

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      8054333..8058713 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139912.5 → NP_648169.2  bip1, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648169.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V457, Q9XZU6
      Related
      FBpp0076462
      Conserved Domains (1) summary
      smart00980
      Location:34 → 91
      THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion

    2. NM_001169904.2 → NP_001163375.1  bip1, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163375.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C6SV53
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    C6SV53 C6SV53
    Q8T9I2 Q8T9I2
    Q9V457 Q9V457
    Q9XZU6 Q9XZU6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools