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    Atg8a Autophagy-related 8a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 32001, updated on 17-Dec-2024

    Summary

    Official Symbol
    Atg8aprovided by FlyBase
    Official Full Name
    Autophagy-related 8aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0052672
    Locus tag
    Dmel_CG32672
    See related
    AllianceGenome:FB:FBgn0052672
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    agt8a; Atg-8a; atg8; Atg8; ATG8; Atg8/LC3; ATG8/LC3; atg8a; atg8A; Atg8A; ATG8a; ATG8A; Atg8alpha; BcDNA:LD05816; CG1534; CG32672; dAtg8; dAtg8a; DmAtg8a; Dmel\CG32672; DrAtg8a; LC3; LC3/Atg8
    Summary
    Enables protein kinase binding activity. Involved in several processes, including determination of adult lifespan; larval midgut cell programmed cell death; and reticulophagy. Located in amphisome; autolysosome; and type I terminal bouton. Is expressed in adult head and ovary. Orthologous to several human genes including GABARAP (GABA type A receptor-associated protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Atg8a in Genome Data Viewer
    Location:
    9E6-9E7; 1-32 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (10764878..10768338, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (10658911..10662371, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene raspberry Neighboring gene Rabphilin Neighboring gene Transport and Golgi organization 5 Neighboring gene BTB (POZ) domain containing 9 Neighboring gene uncharacterized protein Neighboring gene Adenine nucleotide translocase 2

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables GABA receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables phosphatidylethanolamine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein kinase binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein tag activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables ubiquitin protein ligase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in autophagosome assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in autophagosome maturation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in autophagy IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in cellular response to nitrogen starvation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in determination of adult lifespan IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in determination of adult lifespan IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in larval midgut cell programmed cell death IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in macroautophagy IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in macroautophagy IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in mitophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in regulation of protein ubiquitination IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in reticulophagy IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in amphisome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in autolysosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in autophagosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in autophagosome membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in type I terminal bouton IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    Autophagy-related 8a
    Names
    Atg8a-PA
    Atg8a-PB
    Atg8a-PC
    Autophagy-specific gene 8a
    CG32672-PA
    CG32672-PB
    CG32672-PC
    autophagy-related 8 protein
    autophagy-related 8a

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      10764878..10768338 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_167245.3NP_727447.1  Autophagy-related 8a, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_727447.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W2S2
      Related
      FBpp0071427
      Conserved Domains (1) summary
      cd01611
      Location:5116
      GABARAP; Ubiquitin domain of GABA-receptor-associated protein
    2. NM_001298158.1NP_001285087.1  Autophagy-related 8a, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285087.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JJA8
      Conserved Domains (1) summary
      cd01611
      Location:691
      GABARAP; Ubiquitin domain of GABA-receptor-associated protein
    3. NM_001298159.1NP_001285088.1  Autophagy-related 8a, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285088.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JEE0
      Conserved Domains (1) summary
      cd01611
      Location:7102
      GABARAP; Ubiquitin domain of GABA-receptor-associated protein