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    CG10395 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35490, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10395provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033019
    Locus tag
    Dmel_CG10395
    See related
    AllianceGenome:FB:FBgn0033019
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10395; mdcds_12730
    Summary
    Predicted to be involved in chromatin remodeling. Predicted to be part of Ino80 complex. Is expressed in organism. Orthologous to human INO80B (INO80 complex subunit B). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10395 in Genome Data Viewer
    Location:
    41E5-41E5; 2-55 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (5350477..5351972)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (1237982..1239477)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene super sex combs Neighboring gene uncharacterized protein Neighboring gene Intraflagellar transport 20 Neighboring gene Cytochrome c oxidase subunit 4-like Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and bioinformatic analysis of 41C and the 2R heterochromatin of Drosophila melanogaster: a window on the heterochromatin-euchromatin junction. Myster SH, et al. Genetics, 2004 Feb. PMID 15020470, Free PMC Article
    2. Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster. Rossi F, et al. Genetics, 2007 Feb. PMID 17110485, Free PMC Article
    3. FISH analysis of Drosophila melanogaster heterochromatin using BACs and P elements. Corradini N, et al. Chromosoma, 2003 Jul. PMID 12827380
    4. Comparative Genomic Analyses Provide New Insights into the Evolutionary Dynamics of Heterochromatin in Drosophila. Caizzi R, et al. PLoS Genet, 2016 Aug. PMID 27513559, Free PMC Article
    5. Screen for mitochondrial DNA copy number maintenance genes reveals essential role for ATP synthase. Fukuoh A, et al. Mol Syst Biol, 2014 Jun 21. PMID 24952591, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of Ino80 complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10395-PD
    CG10395-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      5350477..5351972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136323.4 → NP_610167.3  uncharacterized protein Dmel_CG10395, isoform E [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z6E8, A8E6I7
      Conserved Domains (2) summary
      pfam04438
      Location:237 → 268
      zf-HIT; HIT zinc finger
      pfam04795
      Location:157 → 222
      PAPA-1; PAPA-1-like conserved region

    2. NM_165428.4 → NP_724408.4  uncharacterized protein Dmel_CG10395, isoform D [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z6E8, A8E6I7
      Conserved Domains (2) summary
      pfam04438
      Location:237 → 268
      zf-HIT; HIT zinc finger
      pfam04795
      Location:157 → 222
      PAPA-1; PAPA-1-like conserved region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z6E8 A1Z6E8
    Q95RL9 Q95RL9

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