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    Cog4 Component of oligomeric golgi complex 4 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34442, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cog4provided by FlyBase
    Official Full Name
    Component of oligomeric golgi complex 4provided by FlyBase
    Primary source
    FLYBASE:FBgn0032258
    Locus tag
    Dmel_CG7456
    See related
    AllianceGenome:FB:FBgn0032258
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG7456; Dmel\CG7456
    Summary
    Predicted to be involved in Golgi organization; intra-Golgi vesicle-mediated transport; and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Part of Golgi transport complex. Is expressed in several structures, including adult head; embryonic dorsal epidermis; embryonic ventral epidermis; embryonic/larval midgut primordium; and gland. Human ortholog(s) of this gene implicated in Saul-Wilson syndrome and congenital disorder of glycosylation type IIj. Orthologous to human COG4 (component of oligomeric golgi complex 4). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Cog4 in Genome Data Viewer
    Location:
    31F1-31F1; 2-43 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (10485538..10488622, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (10485538..10488622, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene RluA pseudouridine synthase 1 Neighboring gene RluA pseudouridine synthase 2 Neighboring gene Grip75 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Myosin 31DF Neighboring gene antisense RNA:CR44224

    Genomic regions, transcripts, and products

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in Golgi organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in Golgi organization ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in intra-Golgi vesicle-mediated transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of Golgi transport complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of Golgi transport complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of Golgi transport complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    component of oligomeric golgi complex 4
    Names
    CG7456-PA
    Cog4-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      10485538..10488622 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135569.4NP_609413.1  component of oligomeric golgi complex 4 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609413.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95TN4, Q9VKU6
      Related
      FBpp0079628
      Conserved Domains (1) summary
      smart00762
      Location:166497
      Cog4; COG4 transport protein