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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001358443.1 → NP_001345372.1 OX-2 membrane glycoprotein isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region and uses a downstream start codon compared to variant 1. It encodes isoform 2 which has a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AC117686, AC117783
- Conserved Domains (2) summary
-
- pfam00047
Location:69 → 155
- ig; Immunoglobulin domain
- cl11960
Location:1 → 64
- Ig; Immunoglobulin domain
-
NM_010818.3 → NP_034948.3 OX-2 membrane glycoprotein isoform 1 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
BC054759, CN665640
- Consensus CDS
-
CCDS49860.1
- UniProtKB/Swiss-Prot
- O54816, O54901, Q9JHD5
- UniProtKB/TrEMBL
-
Q80VX2
- Related
- ENSMUSP00000130518.2, ENSMUST00000163230.8
- Conserved Domains (2) summary
-
- cd05846
Location:44 → 140
- Ig1_MRC-OX-2_like; First immunoglobulin (Ig) domain of rat MRC OX-2 antigen (also known as CD200) and similar proteins
- pfam00047
Location:143 → 229
- ig; Immunoglobulin domain
RNA
-
NR_189160.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC117686, AC117783
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000082.7 Reference GRCm39 C57BL/6J
- Range
-
45202474..45229419 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017316890.3 → XP_017172379.1 OX-2 membrane glycoprotein isoform X1
- Conserved Domains (1) summary
-
- pfam00047
Location:47 → 133
- ig; Immunoglobulin domain