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    BABAM1 BRISC and BRCA1 A complex member 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 504517, updated on 1-Jan-2025

    Summary

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    Official Symbol
    BABAM1provided by VGNC
    Official Full Name
    BRISC and BRCA1 A complex member 1provided by VGNC
    Primary source
    VGNC:VGNC:55198
    See related
    Ensembl:ENSBTAG00000012587
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    MERIT40; C19orf62; C7H19orf62
    Orthologs
    human mouse all
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    Genomic context

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    See BABAM1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (5837520..5843385, complement)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 8 Neighboring gene ankyrin repeat and LEM domain containing 1 Neighboring gene USH1 protein network component harmonin binding protein 1 Neighboring gene uncharacterized LOC132345677

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC139524

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in double-strand break repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic G2 DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BRCA1-A complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of BRISC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BRISC and BRCA1-A complex member 1
    Names
    BRCA1-A complex subunit MERIT40
    mediator of RAP80 interactions and targeting subunit of 40 kDa
    new component of the BRCA1-A complex

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076801.1 → NP_001070269.1  BRISC and BRCA1-A complex member 1

      See identical proteins and their annotated locations for NP_001070269.1

      Status: PROVISIONAL

      Source sequence(s)
      BC123408
      UniProtKB/Swiss-Prot
      Q08E57
      UniProtKB/TrEMBL
      A0AAF6ZH32
      Conserved Domains (1) summary
      cl26386
      Location:24 → 91
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      5837520..5843385 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005208487.5 → XP_005208544.1  BRISC and BRCA1-A complex member 1 isoform X1

      See identical proteins and their annotated locations for XP_005208544.1

      UniProtKB/Swiss-Prot
      Q08E57
      UniProtKB/TrEMBL
      A0AAF6ZH32
      Conserved Domains (1) summary
      cl26386
      Location:24 → 91
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

    2. XM_005208486.5 → XP_005208543.1  BRISC and BRCA1-A complex member 1 isoform X1

      See identical proteins and their annotated locations for XP_005208543.1

      UniProtKB/Swiss-Prot
      Q08E57
      UniProtKB/TrEMBL
      A0AAF6ZH32
      Related
      ENSBTAP00000044652.3, ENSBTAT00000047445.4
      Conserved Domains (1) summary
      cl26386
      Location:24 → 91
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q08E57.1 GenPept UniProtKB/Swiss-Prot:Q08E57

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