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    EXOC6 exocyst complex component 6 [ Bos taurus (domestic cattle) ]

    Gene ID: 507518, updated on 27-Dec-2024

    Summary

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    Official Symbol
    EXOC6provided by VGNC
    Official Full Name
    exocyst complex component 6provided by VGNC
    Primary source
    VGNC:VGNC:28650
    See related
    BGD:BT21666; Ensembl:ENSBTAG00000021116
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See EXOC6 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 26 NC_037353.1 (14211625..14401745)

    Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein eS12-like Neighboring gene hematopoietically expressed homeobox Neighboring gene cytochrome P450 family 26 subfamily C member 1 Neighboring gene cytochrome P450 family 26 subfamily A member 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037353.1 Chromosome 26 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC152212

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in Golgi to plasma membrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle tethering involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of exocyst IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exocyst complex component 6
    Names
    SEC15-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101885.1 → NP_001095355.1  exocyst complex component 6

      See identical proteins and their annotated locations for NP_001095355.1

      Status: PROVISIONAL

      Source sequence(s)
      BC148081
      UniProtKB/TrEMBL
      A0A3Q1M4P7, A6QLT7
      Related
      ENSBTAP00000063237.2, ENSBTAT00000084958.2
      Conserved Domains (1) summary
      pfam04091
      Location:455 → 761
      Sec15; Exocyst complex subunit Sec15-like

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037353.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      14211625..14401745
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059881805.1 → XP_059737788.1  exocyst complex component 6 isoform X6

      UniProtKB/TrEMBL
      A0AAA9SI95

    2. XM_059881806.1 → XP_059737789.1  exocyst complex component 6 isoform X7

      UniProtKB/TrEMBL
      A0AAA9SI95

    3. XM_024985548.2 → XP_024841316.2  exocyst complex component 6 isoform X4

      UniProtKB/TrEMBL
      A0AAA9TCS6
      Related
      ENSBTAP00000096468.1, ENSBTAT00000089206.1

    4. XM_010819842.4 → XP_010818144.3  exocyst complex component 6 isoform X1

      UniProtKB/TrEMBL
      A0AAA9TRG6

    5. XM_010819843.4 → XP_010818145.3  exocyst complex component 6 isoform X3

      UniProtKB/TrEMBL
      A0AAA9TRG6
      Related
      ENSBTAP00000101187.1, ENSBTAT00000104735.1

    6. XM_005225488.5 → XP_005225545.1  exocyst complex component 6 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1M4P7, F1N005
      Related
      ENSBTAP00000028134.6, ENSBTAT00000028134.7
      Conserved Domains (1) summary
      pfam04091
      Location:455 → 771
      Sec15; Exocyst complex subunit Sec15-like

    7. XM_024985549.2 → XP_024841317.1  exocyst complex component 6 isoform X5

      UniProtKB/TrEMBL
      A0AAA9TCS6
      Conserved Domains (1) summary
      pfam04091
      Location:432 → 748
      Sec15; Exocyst complex subunit Sec15-like

    8. XM_024985551.2 → XP_024841319.1  exocyst complex component 6 isoform X9

      UniProtKB/TrEMBL
      A0AAA9TCS6
      Related
      ENSBTAP00000099962.1, ENSBTAT00000130828.1
      Conserved Domains (1) summary
      pfam04091
      Location:432 → 738
      Sec15; Exocyst complex subunit Sec15-like

    9. XM_024985550.2 → XP_024841318.1  exocyst complex component 6 isoform X8

      UniProtKB/TrEMBL
      A0AAA9TRG6
      Conserved Domains (1) summary
      pfam04091
      Location:408 → 724
      Sec15; Exocyst complex subunit Sec15-like
    Nucleotide Protein Strain
    Heading Accession and Version

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