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    RTN4IP1 reticulon 4 interacting protein 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 506626, updated on 29-Jan-2025

    Summary

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    Official Symbol
    RTN4IP1provided by VGNC
    Official Full Name
    reticulon 4 interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:34205
    See related
    BGD:BT25275; Ensembl:ENSBTAG00000017554
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RTN4IP1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (43329438..43381099)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132346103 Neighboring gene glutaminyl-tRNA amidotransferase subunit QRSL1 Neighboring gene crystallin beta-gamma domain containing 1 Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene autophagy related 5 Neighboring gene small ribosomal subunit protein eS1-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC143304

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    reticulon-4-interacting protein 1, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075275.1 → NP_001068743.1  reticulon-4-interacting protein 1, mitochondrial precursor

      See identical proteins and their annotated locations for NP_001068743.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120354
      UniProtKB/Swiss-Prot
      Q0VC50
      UniProtKB/TrEMBL
      A0A452DJN0
      Conserved Domains (1) summary
      cd08248
      Location:43 → 394
      RTN4I1; Human Reticulon 4 Interacting Protein 1

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      43329438..43381099
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005210832.4 → XP_005210889.1  reticulon-4-interacting protein 1, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_005210889.1

      UniProtKB/Swiss-Prot
      Q0VC50
      UniProtKB/TrEMBL
      A0A452DJN0
      Related
      ENSBTAP00070017115.1, ENSBTAT00070028108.1
      Conserved Domains (1) summary
      cd08248
      Location:43 → 394
      RTN4I1; Human Reticulon 4 Interacting Protein 1

    2. XM_005210833.5 → XP_005210890.1  reticulon-4-interacting protein 1, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_005210890.1

      UniProtKB/Swiss-Prot
      Q0VC50
      UniProtKB/TrEMBL
      A0A452DJN0
      Conserved Domains (1) summary
      cd08248
      Location:43 → 394
      RTN4I1; Human Reticulon 4 Interacting Protein 1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0VC50.1 GenPept UniProtKB/Swiss-Prot:Q0VC50

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