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    UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 535325, updated on 27-Dec-2024

    Summary

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    Official Symbol
    UAP1provided by VGNC
    Official Full Name
    UDP-N-acetylglucosamine pyrophosphorylase 1provided by VGNC
    Primary source
    VGNC:VGNC:36559
    See related
    BGD:BT21806; Ensembl:ENSBTAG00000010206
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See UAP1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (6906312..6938646, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101907096 Neighboring gene hydroxysteroid 17-beta dehydrogenase 7 Neighboring gene discoidin domain receptor tyrosine kinase 2 Neighboring gene uncharacterized LOC112445925 Neighboring gene steroidogenic acute regulatory protein pseudogene Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene U2AF homology motif kinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC137629

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-N-acetylglucosamine diphosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in UDP-N-acetylglucosamine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    UDP-N-acetylhexosamine pyrophosphorylase
    Names
    UDP-N-acteylglucosamine pyrophosphorylase 1
    NP_001039869.1
    XP_005203583.1
    XP_005203584.1
    XP_059740696.1
    XP_059740697.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046404.1 → NP_001039869.1  UDP-N-acetylhexosamine pyrophosphorylase

      See identical proteins and their annotated locations for NP_001039869.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112693
      UniProtKB/TrEMBL
      A0AAA9SUJ9, Q2KIC1
      Related
      ENSBTAP00000013466.3, ENSBTAT00000013466.5
      Conserved Domains (1) summary
      cd04193
      Location:88 → 410
      UDPGlcNAc_PPase; UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      6906312..6938646 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059884714.1 → XP_059740697.1  UDP-N-acetylhexosamine pyrophosphorylase isoform X4

    2. XM_005203527.4 → XP_005203584.1  UDP-N-acetylhexosamine pyrophosphorylase isoform X3

      See identical proteins and their annotated locations for XP_005203584.1

      UniProtKB/TrEMBL
      A0A3Q1LZ31, A0AAA9SUJ9
      Related
      ENSBTAP00000066071.1, ENSBTAT00000076081.2
      Conserved Domains (1) summary
      cd04193
      Location:88 → 410
      UDPGlcNAc_PPase; UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc

    3. XM_005203526.4 → XP_005203583.1  UDP-N-acetylhexosamine pyrophosphorylase isoform X2

      See identical proteins and their annotated locations for XP_005203583.1

      UniProtKB/TrEMBL
      A0AAA9SUJ9, A5D9G1
      Conserved Domains (1) summary
      cd04193
      Location:88 → 410
      UDPGlcNAc_PPase; UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc

    4. XM_059884713.1 → XP_059740696.1  UDP-N-acetylhexosamine pyrophosphorylase isoform X1

      UniProtKB/TrEMBL
      A0AAA9SUJ9, F1MJP7
    Nucleotide Protein Strain
    Heading Accession and Version

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