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    CZIB CXXC motif containing zinc binding protein [ Bos taurus (domestic cattle) ]

    Gene ID: 517857, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CZIBprovided by VGNC
    Official Full Name
    CXXC motif containing zinc binding proteinprovided by VGNC
    Primary source
    VGNC:VGNC:54904
    See related
    BGD:BT14336; Ensembl:ENSBTAG00000003484
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C1orf123; C3H1orf123
    Orthologs
    human mouse all
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    Genomic context

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    See CZIB in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (93014848..93021973)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 8 Neighboring gene uncharacterized LOC132344907 Neighboring gene mago homolog, exon junction complex subunit Neighboring gene uncharacterized LOC112446013 Neighboring gene carnitine palmitoyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC133492

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CXXC motif containing zinc binding protein
    Names
    UPF0587 protein C1orf123 homolog
    chromosome 3 C1orf123 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038130.2 → NP_001033219.1  CXXC motif containing zinc binding protein

      See identical proteins and their annotated locations for NP_001033219.1

      Status: PROVISIONAL

      Source sequence(s)
      BC108240
      UniProtKB/Swiss-Prot
      Q32P66
      UniProtKB/TrEMBL
      F1N0N6
      Related
      ENSBTAP00000060130.2, ENSBTAT00000082040.2
      Conserved Domains (1) summary
      pfam05907
      Location:6 → 157
      DUF866; Eukaryotic protein of unknown function (DUF866)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      93014848..93021973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010803504.4 → XP_010801806.1  CXXC motif containing zinc binding protein isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LX93
      Conserved Domains (1) summary
      pfam05907
      Location:6 → 138
      DUF866; Eukaryotic protein of unknown function (DUF866)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q32P66.1 GenPept UniProtKB/Swiss-Prot:Q32P66

    Gene LinkOut

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