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    BSCL2 BSCL2 lipid droplet biogenesis associated, seipin [ Bos taurus (domestic cattle) ]

    Gene ID: 513558, updated on 29-Jan-2025

    Summary

    Official Symbol
    BSCL2provided by VGNC
    Official Full Name
    BSCL2 lipid droplet biogenesis associated, seipinprovided by VGNC
    Primary source
    VGNC:VGNC:26577
    See related
    BGD:BT23858; Ensembl:ENSBTAG00000002503
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See BSCL2 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (41015970..41028648, complement)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene UBX domain protein 1 Neighboring gene LRRN4 C-terminal like Neighboring gene G protein subunit gamma 3 Neighboring gene heterogeneous nuclear ribonucleoprotein U like 2 Neighboring gene tetratricopeptide repeat domain 9C

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Pathways from PubChem

    General gene information

    Clone Names

    • MGC128416

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lipid droplet organization PubMed 
    involved_in lipid storage PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane PubMed 

    General protein information

    Preferred Names
    seipin
    Names
    BSCL2, seipin lipid droplet biogenesis associated
    Bernardinelli-Seip congenital lipodystrophy 2 (seipin)
    bernardinelli-Seip congenital lipodystrophy type 2 protein homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001015589.1 → NP_001015589.1  seipin

      See identical proteins and their annotated locations for NP_001015589.1

      Status: PROVISIONAL

      Source sequence(s)
      BT020874
      UniProtKB/Swiss-Prot
      Q5E9P6
      UniProtKB/TrEMBL
      A0A3Q1NNA0
      Conserved Domains (1) summary
      pfam06775
      Location:39 → 242
      Seipin; Putative adipose-regulatory protein (Seipin)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      41015970..41028648 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059882878.1 → XP_059738861.1  seipin isoform X2

      UniProtKB/TrEMBL
      A0A3Q1NNA0
      Related
      ENSBTAP00070043579.1, ENSBTAT00070071405.1
    2. XM_059882869.1 → XP_059738852.1  seipin isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    3. XM_059882873.1 → XP_059738856.1  seipin isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    4. XM_059882868.1 → XP_059738851.1  seipin isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    5. XM_059882874.1 → XP_059738857.1  seipin isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    6. XM_059882880.1 → XP_059738863.1  seipin isoform X3

      UniProtKB/TrEMBL
      A0A3Q1NNA0
      Related
      ENSBTAP00070043603.1, ENSBTAT00070071444.1
    7. XM_059882872.1 → XP_059738855.1  seipin isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    8. XM_059882877.1 → XP_059738860.1  seipin isoform X2

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    9. XM_059882870.1 → XP_059738853.1  seipin isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    10. XM_059882875.1 → XP_059738858.1  seipin isoform X2

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    11. XM_059882871.1 → XP_059738854.1  seipin isoform X1

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    12. XM_059882881.1 → XP_059738864.1  seipin isoform X4

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    13. XM_059882879.1 → XP_059738862.1  seipin isoform X3

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    14. XM_059882876.1 → XP_059738859.1  seipin isoform X2

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    15. XM_059882884.1 → XP_059738867.1  seipin isoform X7

      UniProtKB/TrEMBL
      A0A3Q1NNA0
    16. XM_059882883.1 → XP_059738866.1  seipin isoform X6

      UniProtKB/TrEMBL
      A0A3Q1NNA0, Q2KJD5
    17. XM_059882882.1 → XP_059738865.1  seipin isoform X5

      UniProtKB/TrEMBL
      A0A3Q1NNA0
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