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    ZNF521 zinc finger protein 521 [ Bos taurus (domestic cattle) ]

    Gene ID: 538792, updated on 1-Jan-2025

    Summary

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    Official Symbol
    ZNF521provided by VGNC
    Official Full Name
    zinc finger protein 521provided by VGNC
    Primary source
    VGNC:VGNC:37296
    See related
    BGD:BT27384; Ensembl:ENSBTAG00000007383
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF521 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 24 NC_037351.1 (31380676..31692915)

    Chromosome 24 - NC_037351.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-2380 Neighboring gene SS18 subunit of BAF chromatin remodeling complex Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene microRNA mir-378c Neighboring gene microRNA mir-12051 Neighboring gene uncharacterized LOC112444180 Neighboring gene uncharacterized LOC132343768

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037351.1 Chromosome 24 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC160015

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin insulator sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 521

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105419.1 → NP_001098889.1  zinc finger protein 521

      Status: PROVISIONAL

      Source sequence(s)
      BC153228
      UniProtKB/TrEMBL
      A0A3Q1LPJ4, A7Z030
      Related
      ENSBTAP00000045301.4, ENSBTAT00000048222.4
      Conserved Domains (2) summary
      COG5048
      Location:84 → 236
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:120 → 140
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037351.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      31380676..31692915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005224070.5 → XP_005224127.1  zinc finger protein 521 isoform X3

      UniProtKB/TrEMBL
      A0A3Q1LPJ4, F1N5E2
      Conserved Domains (2) summary
      COG5048
      Location:84 → 236
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:120 → 140
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_015460072.3 → XP_015315558.1  zinc finger protein 521 isoform X4

      UniProtKB/TrEMBL
      A0A3Q1LPJ4
      Conserved Domains (2) summary
      COG5189
      Location:474 → 556
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:416 → 436
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_059880946.1 → XP_059736929.1  zinc finger protein 521 isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LPJ4

    4. XM_059880945.1 → XP_059736928.1  zinc finger protein 521 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LPJ4
    Nucleotide Protein Strain
    Heading Accession and Version

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