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    ALDH16A1 aldehyde dehydrogenase 16 family member A1 [ Bos taurus (domestic cattle) ]

    Gene ID: 506329, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ALDH16A1provided by VGNC
    Official Full Name
    aldehyde dehydrogenase 16 family member A1provided by VGNC
    Primary source
    VGNC:VGNC:25806
    See related
    BGD:BT24499; Ensembl:ENSBTAG00000000330
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ALDH16A1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (55910374..55924829)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene parathyroid hormone 2 Neighboring gene solute carrier family 17 member 7 Neighboring gene golgi associated olfactory signaling regulator Neighboring gene PIH1 domain containing 1 Neighboring gene fms related receptor tyrosine kinase 3 ligand Neighboring gene small nucleolar RNA Z195/SNORD33/SNORD32 family Neighboring gene ribosomal protein L13a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC166224

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aldehyde dehydrogenase family 16 member A1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101869.1 → NP_001095339.1  aldehyde dehydrogenase family 16 member A1

      See identical proteins and their annotated locations for NP_001095339.1

      Status: PROVISIONAL

      Source sequence(s)
      BC150121
      UniProtKB/Swiss-Prot
      A6QR56
      UniProtKB/TrEMBL
      F1N441
      Related
      ENSBTAP00000040728.5, ENSBTAT00000043139.5
      Conserved Domains (2) summary
      cd07111
      Location:19 → 492
      ALDH_F16; Aldehyde dehydrogenase family 16A1-like
      cl11961
      Location:526 → 763
      ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      55910374..55924829
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A6QR56.1 GenPept UniProtKB/Swiss-Prot:A6QR56

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