U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PACC1 proton activated chloride channel 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 616392, updated on 30-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    PACC1provided by VGNC
    Official Full Name
    proton activated chloride channel 1provided by VGNC
    Primary source
    VGNC:VGNC:36028
    See related
    BGD:BT28577; EnsemblRapid:ENSBTAG00070007383
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    PAC; C1orf75; TMEM206; C16H1orf75
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PACC1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (71144037..71179550)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112441863 Neighboring gene neudesin neurotrophic factor Neighboring gene protein phosphatase 2 regulatory subunit B'alpha Neighboring gene uncharacterized LOC112441935 Neighboring gene uncharacterized LOC112441864

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC137693

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    proton-activated chloride channel
    Names
    transmembrane protein 206

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046580.2 → NP_001040045.1  proton-activated chloride channel

      See identical proteins and their annotated locations for NP_001040045.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112871
      UniProtKB/Swiss-Prot
      Q2KHV2
      UniProtKB/TrEMBL
      A0AAF6YHC3
      Related
      ENSBTAP00070009711.1, ENSBTAT00070016741.1
      Conserved Domains (1) summary
      pfam15122
      Location:55 → 349
      TMEM206; TMEM206 protein family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      71144037..71179550
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059875546.1 → XP_059731529.1  proton-activated chloride channel isoform X2

    2. XM_059875545.1 → XP_059731528.1  proton-activated chloride channel isoform X1

      UniProtKB/TrEMBL
      A0AAF6YHC3
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2KHV2.1 GenPept UniProtKB/Swiss-Prot:Q2KHV2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials