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    B3GAT3 beta-1,3-glucuronyltransferase 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 404162, updated on 27-Dec-2024

    Summary

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    Official Symbol
    B3GAT3provided by VGNC
    Official Full Name
    beta-1,3-glucuronyltransferase 3provided by VGNC
    Primary source
    VGNC:VGNC:26378
    See related
    BGD:BT10659; Ensembl:ENSBTAG00000016950
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See B3GAT3 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (40959799..40964658, complement)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene citrate synthase lysine methyltransferase Neighboring gene uncharacterized LOC132344205 Neighboring gene metastasis associated 1 family member 2 Neighboring gene EMAP like 3 Neighboring gene retinal outer segment membrane protein 1 Neighboring gene glucosidase II alpha subunit Neighboring gene integrator complex subunit 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3
    Names
    beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)
    glucuronyltransferase I
    NP_991374.2
    XP_005226936.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205805.3 → NP_991374.2  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3

      See identical proteins and their annotated locations for NP_991374.2

      Status: PROVISIONAL

      Source sequence(s)
      BC103004
      UniProtKB/TrEMBL
      F1N6Z1, Q3SZB0, Q863K8
      Related
      ENSBTAP00000022546.5, ENSBTAT00000022546.6
      Conserved Domains (1) summary
      cd00218
      Location:75 → 313
      GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      40959799..40964658 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005226879.4 → XP_005226936.2  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LG25
      Related
      ENSBTAP00000057284.2, ENSBTAT00000080834.2
      Conserved Domains (1) summary
      cd00218
      Location:115 → 343
      GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
    Nucleotide Protein Strain
    Heading Accession and Version

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