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    PARK7 Parkinsonism associated deglycase [ Bos taurus (domestic cattle) ]

    Gene ID: 511268, updated on 1-Jan-2025

    Summary

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    Official Symbol
    PARK7provided by VGNC
    Official Full Name
    Parkinsonism associated deglycaseprovided by VGNC
    Primary source
    VGNC:VGNC:32586
    See related
    BGD:BT11905; Ensembl:ENSBTAG00000020518
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    DJ1; DJ-1
    Orthologs
    human mouse all
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    Genomic context

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    See PARK7 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (45400216..45417031, complement)

    Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene cyclin-H-like Neighboring gene uncharacterized LOC132342469 Neighboring gene ERBB receptor feedback inhibitor 1 Neighboring gene TNF receptor superfamily member 9 Neighboring gene urotensin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on peroxide as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycolate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glyoxal metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Parkinson disease protein 7 homolog
    Names
    Parkinson disease (autosomal recessive, early onset) 7
    maillard deglycase
    parkinson disease protein 7 homolog
    protein DJ-1
    protein deglycase DJ-1
    protein/nucleic acid deglycase DJ-1
    NP_001015572.1
    XP_005217012.1
    XP_005217013.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001015572.1 → NP_001015572.1  Parkinson disease protein 7 homolog

      See identical proteins and their annotated locations for NP_001015572.1

      Status: PROVISIONAL

      Source sequence(s)
      BT021074
      UniProtKB/Swiss-Prot
      Q3ZC96, Q5E946
      UniProtKB/TrEMBL
      A0AAA9TMN5
      Related
      ENSBTAP00000027339.3, ENSBTAT00000027339.5
      Conserved Domains (1) summary
      TIGR01383
      Location:5 → 184
      not_thiJ; DJ-1 family protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      45400216..45417031 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005216955.5 → XP_005217012.1  Parkinson disease protein 7 homolog isoform X1

      See identical proteins and their annotated locations for XP_005217012.1

      UniProtKB/Swiss-Prot
      Q3ZC96, Q5E946
      UniProtKB/TrEMBL
      A0AAA9TMN5
      Conserved Domains (1) summary
      TIGR01383
      Location:5 → 184
      not_thiJ; DJ-1 family protein

    2. XM_005216956.5 → XP_005217013.1  Parkinson disease protein 7 homolog isoform X1

      See identical proteins and their annotated locations for XP_005217013.1

      UniProtKB/Swiss-Prot
      Q3ZC96, Q5E946
      UniProtKB/TrEMBL
      A0AAA9TMN5
      Conserved Domains (1) summary
      TIGR01383
      Location:5 → 184
      not_thiJ; DJ-1 family protein
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5E946.1 GenPept UniProtKB/Swiss-Prot:Q5E946

    Gene LinkOut

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