SYT4 synaptotagmin 4 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: SYT4provided by VGNC
Official Full Name: synaptotagmin 4provided by VGNC
Primary source: VGNC:VGNC:35543
See related: BGD:BT18737; Ensembl:ENSBTAG00000001801
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_12	current	ARS-UCD2.0 (GCF_002263795.3)	24	NC_037351.1 (12650269..12660067)

Chromosome 24 - NC_037351.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037351.1 Chromosome 24 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Dominette sequence data
BioProject: PRJNA294306
Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables SNARE binding	IEA Inferred from Electronic Annotation more info	PubMed
enables calcium ion binding	IEA Inferred from Electronic Annotation more info	PubMed
enables calcium-dependent phospholipid binding	IEA Inferred from Electronic Annotation more info	PubMed
enables clathrin binding	IEA Inferred from Electronic Annotation more info	PubMed
enables phosphatidylserine binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in calcium ion-regulated exocytosis of neurotransmitter	IEA Inferred from Electronic Annotation more info	PubMed
involved_in cellular response to calcium ion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of calcium ion-dependent exocytosis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of dopamine secretion	IEA Inferred from Electronic Annotation more info	PubMed
involved_in vesicle fusion	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in axon	IEA Inferred from Electronic Annotation more info	PubMed
located_in exocytic vesicle	IEA Inferred from Electronic Annotation more info	PubMed
located_in plasma membrane	IEA Inferred from Electronic Annotation more info	PubMed
located_in synapse	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: synaptotagmin-4

Names: synaptotagmin IV

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001098108.1 → NP_001091577.1 synaptotagmin-4

See identical proteins and their annotated locations for NP_001091577.1

Status: PROVISIONAL

Source sequence(s)

BC140533

UniProtKB/TrEMBL

A0AAA9S8S0, A5D7F2, F1N2H7

Related

ENSBTAP00000002357.3, ENSBTAT00000002357.4

Conserved Domains (2) summary

cd08388
Location:153 → 277

C2A_Synaptotagmin-4-11; C2A domain first repeat present in Synaptotagmins 4 and 11

cd08404
Location:288 → 423

C2B_Synaptotagmin-4; C2 domain second repeat present in Synaptotagmin 4