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    PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma [ Bos taurus (domestic cattle) ]

    Gene ID: 540005, updated on 30-Jan-2025

    Summary

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    Official Symbol
    PIP4K2Cprovided by VGNC
    Official Full Name
    phosphatidylinositol-5-phosphate 4-kinase type 2 gammaprovided by VGNC
    Primary source
    VGNC:VGNC:32908
    See related
    BGD:BT12243; EnsemblRapid:ENSBTAG00070014462
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PIP4K2C in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (55886479..55898435, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene deltex E3 ubiquitin ligase 3 Neighboring gene kinesin family member 5A Neighboring gene dynactin subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC140500

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables 1-phosphatidylinositol-5-phosphate 4-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphatidylinositol phosphate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol 5-phosphate 4-kinase type-2 gamma
    Names
    PI(5)P 4-kinase type II gamma
    PIP4KII-gamma
    phosphatidylinositol 5-phosphate 4-kinase type II gamma
    NP_001069664.1
    XP_059742610.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076196.1 → NP_001069664.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma

      See identical proteins and their annotated locations for NP_001069664.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120101
      UniProtKB/Swiss-Prot
      Q0P5F7
      UniProtKB/TrEMBL
      A0AAF6YLH5
      Related
      ENSBTAP00070019186.1, ENSBTAT00070032702.1
      Conserved Domains (1) summary
      smart00330
      Location:72 → 420
      PIPKc; Phosphatidylinositol phosphate kinases

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      55886479..55898435 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059886627.1 → XP_059742610.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X1

      UniProtKB/Swiss-Prot
      Q0P5F7
      UniProtKB/TrEMBL
      A0AAF6YLH5
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0P5F7.1 GenPept UniProtKB/Swiss-Prot:Q0P5F7

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