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    RSPH10B radial spoke head 10 homolog B (Chlamydomonas) [ Bos taurus (domestic cattle) ]

    Gene ID: 510922, updated on 27-Dec-2024

    Summary

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    Gene symbol
    RSPH10B
    Gene description
    radial spoke head 10 homolog B (Chlamydomonas)
    See related
    BGD:BT23477; Ensembl:ENSBTAG00000005908
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

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    See RSPH10B in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (37980855..38006755, complement)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100850875 Neighboring gene CCZ1 homolog, vacuolar protein trafficking and biogenesis associated Neighboring gene PMS1 homolog 2, mismatch repair system component Neighboring gene aminoacyl tRNA synthetase complex interacting multifunctional protein 2 Neighboring gene eukaryotic translation initiation factor 2 alpha kinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    radial spoke head 10 homolog B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001166614.1 → NP_001160086.1  radial spoke head 10 homolog B

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000025
      UniProtKB/Swiss-Prot
      Q1JPG1
      UniProtKB/TrEMBL
      F1N5C9
      Related
      ENSBTAP00000007760.5, ENSBTAT00000007760.6
      Conserved Domains (1) summary
      cl27415
      Location:107 → 321
      COG4642; Uncharacterized conserved protein [Function unknown]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37980855..38006755 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059881246.1 → XP_059737229.1  radial spoke head 10 homolog B isoform X7

      UniProtKB/Swiss-Prot
      Q1JPG1

    2. XM_024984777.2 → XP_024840545.1  radial spoke head 10 homolog B isoform X6

      UniProtKB/Swiss-Prot
      Q1JPG1
      Conserved Domains (1) summary
      cl27415
      Location:107 → 321
      COG4642; Uncharacterized conserved protein [Function unknown]

    3. XM_024984774.2 → XP_024840542.1  radial spoke head 10 homolog B isoform X4

      UniProtKB/Swiss-Prot
      Q1JPG1
      UniProtKB/TrEMBL
      F1N5C9
      Conserved Domains (1) summary
      cl27415
      Location:107 → 321
      COG4642; Uncharacterized conserved protein [Function unknown]

    4. XM_059881245.1 → XP_059737228.1  radial spoke head 10 homolog B isoform X3

      UniProtKB/Swiss-Prot
      Q1JPG1

    5. XM_024984775.2 → XP_024840543.1  radial spoke head 10 homolog B isoform X5

      UniProtKB/Swiss-Prot
      Q1JPG1
      Conserved Domains (1) summary
      cl27415
      Location:107 → 350
      COG4642; Uncharacterized conserved protein [Function unknown]

    6. XM_015460426.3 → XP_015315912.1  radial spoke head 10 homolog B isoform X2

      UniProtKB/Swiss-Prot
      Q1JPG1
      Conserved Domains (3) summary
      smart00698
      Location:226 → 245
      MORN; Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases
      COG4642
      Location:123 → 260
      COG4642; Uncharacterized conserved protein [Function unknown]
      pfam02493
      Location:110 → 130
      MORN; MORN repeat

    7. XM_059881241.1 → XP_059737224.1  radial spoke head 10 homolog B isoform X1

      UniProtKB/Swiss-Prot
      Q1JPG1

    8. XM_059881243.1 → XP_059737226.1  radial spoke head 10 homolog B isoform X1

      UniProtKB/Swiss-Prot
      Q1JPG1

    9. XM_059881242.1 → XP_059737225.1  radial spoke head 10 homolog B isoform X1

      UniProtKB/Swiss-Prot
      Q1JPG1

    10. XM_059881244.1 → XP_059737227.1  radial spoke head 10 homolog B isoform X1

      UniProtKB/Swiss-Prot
      Q1JPG1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1JPG1.2 GenPept UniProtKB/Swiss-Prot:Q1JPG1

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