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    CCDC86 coiled-coil domain containing 86 [ Bos taurus (domestic cattle) ]

    Gene ID: 540913, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CCDC86provided by VGNC
    Official Full Name
    coiled-coil domain containing 86provided by VGNC
    Primary source
    VGNC:VGNC:97248
    See related
    BGD:BT13637; Ensembl:ENSBTAG00000014215
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC86 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (37170153..37178885)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene membrane spanning 4-domains A15 Neighboring gene membrane spanning 4-domains A10 Neighboring gene prostaglandin D2 receptor 2 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene pre-mRNA processing factor 19

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC133962

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 86

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001038574.1 → NP_001033663.1  coiled-coil domain-containing protein 86

      See identical proteins and their annotated locations for NP_001033663.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109492
      UniProtKB/Swiss-Prot
      Q2TBX7
      UniProtKB/TrEMBL
      F1MM20
      Related
      ENSBTAP00000018897.5, ENSBTAT00000018897.7
      Conserved Domains (2) summary
      pfam03879
      Location:230 → 332
      Cgr1; Cgr1 family
      pfam05934
      Location:78 → 205
      MCLC; Mid-1-related chloride channel (MCLC)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      37170153..37178885
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2TBX7.1 GenPept UniProtKB/Swiss-Prot:Q2TBX7

    Gene LinkOut

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