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    ECD ecdysoneless cell cycle regulator [ Bos taurus (domestic cattle) ]

    Gene ID: 524184, updated on 27-Dec-2024

    Summary

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    Official Symbol
    ECDprovided by VGNC
    Official Full Name
    ecdysoneless cell cycle regulatorprovided by VGNC
    Primary source
    VGNC:VGNC:28301
    See related
    BGD:BT16485; Ensembl:ENSBTAG00000000315
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ECD in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 28 NC_037355.1 (29208197..29236904, complement)

    Chromosome 28 - NC_037355.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL21-like Neighboring gene prolyl 4-hydroxylase subunit alpha 1 Neighboring gene nudix hydrolase 13 Neighboring gene tRNA (guanine(10)-N2)-methyltransferase homolog Neighboring gene family with sequence similarity 149 member B1 Neighboring gene DnaJ heat shock protein family (Hsp40) member C9 Neighboring gene mitochondrial ribosomal protein S16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037355.1 Chromosome 28 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC137386

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ecdysoneless homolog
    Names
    ecdysoneless homolog
    suppressor of S. cerevisiae gcr2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046271.1 → NP_001039736.1  protein ecdysoneless homolog

      See identical proteins and their annotated locations for NP_001039736.1

      Status: PROVISIONAL

      Source sequence(s)
      BC112752
      UniProtKB/TrEMBL
      F6QZ92, Q2KI67
      Conserved Domains (1) summary
      pfam07093
      Location:14 → 595
      SGT1; SGT1 protein

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037355.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      29208197..29236904 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005226400.4 → XP_005226457.1  protein ecdysoneless homolog isoform X1

      See identical proteins and their annotated locations for XP_005226457.1

      UniProtKB/TrEMBL
      F6QZ92, Q2KI67
      Related
      ENSBTAP00000000413.6, ENSBTAT00000000413.7
      Conserved Domains (1) summary
      pfam07093
      Location:14 → 595
      SGT1; SGT1 protein
    Nucleotide Protein Strain
    Heading Accession and Version

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