RDH13 retinol dehydrogenase 13 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: RDH13provided by VGNC
Official Full Name: retinol dehydrogenase 13provided by VGNC
Primary source: VGNC:VGNC:33842
See related: BGD:BT14094; Ensembl:ENSBTAG00000030393
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 18

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_12	current	ARS-UCD2.0 (GCF_002263795.3)	18	NC_037345.1 (62338040..62355023)

Chromosome 18 - NC_037345.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Dominette sequence data
BioProject: PRJNA294306
Analysis date: Tue Dec 17 08:57:05 2024

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

PLXNC1 and RDH13 are associated with bilateral convergent strabismus with exophthalmus in German Brown cattle.
Title: PLXNC1 and RDH13 associated with bilateral convergent strabismus with exophthalmus in German Brown cattle.

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables all-trans-retinol dehydrogenase (NADP+) activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in retinal metabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrial inner membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: retinol dehydrogenase 13

Names: retinol dehydrogenase 13 (all-trans and 9-cis); retinol dehydrogenase 13 (all-trans/9-cis)

NP_001068813.1

EC 1.1.1.300

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001075345.2 → NP_001068813.1 retinol dehydrogenase 13

See identical proteins and their annotated locations for NP_001068813.1

Status: PROVISIONAL

Source sequence(s)

BC118441

UniProtKB/TrEMBL

F6PY02, Q17QC2

Related

ENSBTAP00070050732.1, ENSBTAT00070084323.1

Conserved Domains (2) summary

cd09807
Location:38 → 313

retinol-DH_like_SDR_c; retinol dehydrogenases (retinol-DHs), classical (c) SDRs

PRK06197
Location:32 → 318

PRK06197; short chain dehydrogenase; Provisional